Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC103710.2-202ENST00000641454 2853 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-82P-201ENST00000363970 107 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1040P-201ENST00000383974 107 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RNY1P14-201ENST00000384426 108 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 Y_RNA.557-201ENST00000384680 107 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 MIR135A2-201ENST00000384854 100 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1106P-201ENST00000390845 107 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 PTMAP5-201ENST00000393073 333 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RN7SKP156-201ENST00000410308 342 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RN7SKP159-201ENST00000410657 292 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC126124.2-201ENST00000413542 321 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 DBIP2-201ENST00000419076 262 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC245291.1-201ENST00000419501 328 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC243428.1-201ENST00000421099 264 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 HMGB3P8-201ENST00000449709 577 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 Y_RNA.653-201ENST00000459091 95 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC010631.1-201ENST00000474150 156 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 UBE2CP3-201ENST00000502715 450 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 MTCO2P24-201ENST00000515611 426 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-123P-201ENST00000516163 102 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1069P-201ENST00000516612 133 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 SNORA64.4-201ENST00000516632 81 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RN7SKP289-201ENST00000517244 295 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 IGKV2-23-201ENST00000518729 323 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC104027.1-201ENST00000521887 300 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC053481.4-201ENST00000583164 216 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC067852.3-201ENST00000589177 561 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AL355598.1-201ENST00000604169 202 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AL161637.1-201ENST00000622380 412 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 AC092608.2-201ENST00000624427 218 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 RNA5SP196-201ENST00000625967 102 ntBASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
IGKV3D-20A0A0C4DH25 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 SNORD9-201ENST00000362566 104 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1287P-201ENST00000362914 107 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNA5SP51-201ENST00000364750 119 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1303P-201ENST00000364841 107 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 SNORA73.2-201ENST00000364946 201 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-805P-201ENST00000365643 106 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1032P-201ENST00000384100 107 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 Y_RNA.452-201ENST00000384202 108 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 Y_RNA.482-201ENST00000384377 111 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1026P-201ENST00000384465 108 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-601P-201ENST00000384540 107 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-1060P-201ENST00000384664 107 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-754P-201ENST00000391166 107 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 EIF4E2P1-201ENST00000393781 255 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 MIR450B-201ENST00000401182 78 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 MRPL42P3-201ENST00000401492 326 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNA5SP293-201ENST00000410527 113 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 HMGN1P24-201ENST00000412282 298 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 Z99755.1-201ENST00000414048 380 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 SSXP9-201ENST00000417503 292 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RPL23AP33-201ENST00000442301 452 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AC008264.1-201ENST00000447612 367 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AC125238.1-201ENST00000448842 249 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 GSTA11P-201ENST00000452866 669 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RPL12P25-201ENST00000455592 494 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AP002812.1-201ENST00000495378 474 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU2-69P-201ENST00000516061 100 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 RNU6-189P-201ENST00000516120 101 ntBASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.53□□□□□ -2
IGKV3D-20A0A0C4DH25 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms