Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AC025465.3-201ENST00000510570 311 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AC113155.1-201ENST00000511141 769 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 RN7SKP46-201ENST00000515942 234 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 SNORA31.22-201ENST00000517204 135 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AC233702.9-201ENST00000581528 203 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 SNORD91B-202ENST00000608459 222 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AC006023.2-201ENST00000609916 167 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 U73479.1-201ENST00000618062 168 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AL159153.1-201ENST00000619688 317 ntBASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.17□□□□□ -1.58
RTCBQ9Y3I0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 Y_RNA.324-201ENST00000365165 102 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 Y_RNA.518-201ENST00000384552 113 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 MIR1271-201ENST00000408537 86 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 MTCO3P19-201ENST00000415864 321 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AL353621.1-201ENST00000418219 243 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AL590399.6-201ENST00000446396 307 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 RPS15AP34-201ENST00000487776 387 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 HMGB3P17-201ENST00000504195 649 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 GMPSP1-201ENST00000514075 579 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 Y_RNA.673-201ENST00000516306 88 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 RNU6-897P-201ENST00000517135 105 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AC008694.2-201ENST00000517591 306 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AC025627.2-201ENST00000576220 160 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AC130454.1-201ENST00000622948 401 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 AC090971.4-201ENST00000560291 1800 ntBASIC5.16□□□□□ -1.58
RTCBQ9Y3I0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RTCBQ9Y3I0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RTCBQ9Y3I0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.15□□□□□ -1.58
RTCBQ9Y3I0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RTCBQ9Y3I0 MIR491-201ENST00000384877 84 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 MIR34B-201ENST00000385076 84 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 SAR1AP2-201ENST00000392696 594 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AC139712.2-201ENST00000424302 339 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AL358472.1-201ENST00000431295 329 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 PTMAP3-201ENST00000447474 330 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 RNA5SP103-201ENST00000459503 118 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 FO393415.2-201ENST00000480085 343 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 RPL29P14-201ENST00000495837 428 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AC008716.1-201ENST00000511084 513 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 NDUFB4P9-201ENST00000511646 388 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 RNU6-397P-201ENST00000516226 104 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 IGKV2D-23-201ENST00000518179 286 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 TRAV32-201ENST00000553993 340 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 RPS29P30-201ENST00000600975 111 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AL390123.1-201ENST00000603216 237 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AC064801.1-201ENST00000612025 407 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 SDR42E1P4-201ENST00000620894 481 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AC093535.2-201ENST00000624769 2326 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 AC083843.3-201ENST00000623679 2186 ntBASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.15□□□□□ -1.59
RTCBQ9Y3I0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 RNU6-200P-201ENST00000364743 107 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 RNU6-882P-201ENST00000391025 103 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 AL513475.1-201ENST00000406602 315 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 HMGB1P35-201ENST00000503360 598 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 SNORA74D-201ENST00000516404 141 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 SCARNA13-201ENST00000516672 275 ntBASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.14□□□□□ -1.59
RTCBQ9Y3I0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms