Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.46□□□□□ -1.53
LHX6Q9UPM6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
LHX6Q9UPM6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
LHX6Q9UPM6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC126755.2-208ENST00000327792 462 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC138969.1-213ENST00000331436 462 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 RNU6-508P-201ENST00000363231 103 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC007568.1-201ENST00000422912 471 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC113412.1-201ENST00000425840 504 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AL663074.2-201ENST00000440621 479 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC010469.1-201ENST00000463864 576 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AL160236.1-201ENST00000556317 195 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC007494.1-201ENST00000562293 760 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 RMST_8.1-201ENST00000610287 165 ntBASIC5.46□□□□□ -1.54
LHX6Q9UPM6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.46□□□□□ -1.54
LHX6Q9UPM6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 GTF2IP4-201ENST00000453092 2054 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 RNU1-32P-201ENST00000363937 159 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 Y_RNA.361-201ENST00000365515 120 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 RNU6-1014P-201ENST00000383940 103 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 RNU1-77P-201ENST00000390868 162 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 AURKAPS2-201ENST00000454983 333 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 RNA5SP395-201ENST00000516567 118 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 AC006116.3-201ENST00000592968 361 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 AL137843.1-201ENST00000605078 385 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 RNU6-94P-201ENST00000607728 107 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 MARK2P15-201ENST00000432204 2186 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX6Q9UPM6 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.45□□□□□ -1.54
LHX6Q9UPM6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 AC079741.1-201ENST00000321498 212 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 RNU6-1080P-201ENST00000383982 107 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 U1.1-201ENST00000384101 164 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 RNA5SP225-201ENST00000410874 135 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 RNU2-55P-201ENST00000411146 174 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 RN7SL356P-201ENST00000582228 248 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 AC008745.1-201ENST00000604064 271 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 MIR548AY-201ENST00000617669 107 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 AC015914.2-201ENST00000618167 288 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
LHX6Q9UPM6 Z95114.1-201ENST00000624264 14574 ntBASIC5.44□□□□□ -1.54
LHX6Q9UPM6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LHX6Q9UPM6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX6Q9UPM6 AL731532.1-201ENST00000623972 4236 ntBASIC5.43□□□□□ -1.54
LHX6Q9UPM6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LHX6Q9UPM6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
LHX6Q9UPM6 MIR494-201ENST00000349529 81 ntBASIC5.43□□□□□ -1.54
LHX6Q9UPM6 RNU6-228P-201ENST00000362700 106 ntBASIC5.43□□□□□ -1.54
LHX6Q9UPM6 RN7SKP186-201ENST00000365371 303 ntBASIC5.43□□□□□ -1.54
LHX6Q9UPM6 RNU6-146P-201ENST00000384602 108 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms