Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC116312.1-201ENST00000606841 314 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 AC093788.1-201ENST00000609356 927 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 RN7SL853P-201ENST00000617250 223 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP35Q9P2H5 ZNF826P-207ENST00000622273 1910 ntBASIC4.67□□□□□ -1.66
USP35Q9P2H5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP35Q9P2H5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP35Q9P2H5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP35Q9P2H5 NACAP2-201ENST00000318548 624 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 Y_RNA.9-201ENST00000362354 101 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP35Q9P2H5 RNU1-101P-201ENST00000391171 127 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 RNU6-903P-201ENST00000391270 109 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 UBE2V1P2-201ENST00000397758 440 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AL591416.1-201ENST00000404015 867 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 CIR1P3-201ENST00000405137 479 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AL590002.1-201ENST00000406554 418 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 FCF1P9-201ENST00000412546 282 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 EEF1A1P40-201ENST00000412883 573 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 SKA2P1-201ENST00000425592 390 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AC098614.2-201ENST00000426040 255 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 RPL21P40-201ENST00000428586 483 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 NDUFB1P1-201ENST00000435191 180 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 AL118520.1-201ENST00000450770 291 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 RPL21P41-201ENST00000459863 264 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AC093331.1-201ENST00000521474 169 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 TGIF1P1-201ENST00000558095 802 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 AL354950.2-201ENST00000617939 290 ntBASIC4.66□□□□□ -1.66
USP35Q9P2H5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
USP35Q9P2H5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP35Q9P2H5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
USP35Q9P2H5 RNU6-799P-201ENST00000363567 107 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 RNU6-116P-201ENST00000384042 109 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 RNU6-1025P-201ENST00000410629 104 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 C8orf59P1-201ENST00000429930 303 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 MYL8P-204ENST00000431574 518 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 RPL21P13-201ENST00000488305 481 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC139453.3-201ENST00000493276 369 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 OR5AQ1P-201ENST00000527596 927 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP35Q9P2H5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 DNAJC8P1-201ENST00000554535 372 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 MIR1321-201ENST00000637766 79 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC091564.4-201ENST00000533934 2194 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 AC008669.1-201ENST00000565823 2178 ntBASIC4.65□□□□□ -1.67
USP35Q9P2H5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
USP35Q9P2H5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC110774.1-201ENST00000623567 2018 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 RNU6-552P-201ENST00000362869 119 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 Y_RNA.619-201ENST00000410951 90 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 RNU6-55P-201ENST00000411092 107 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 RNU6-954P-201ENST00000411355 107 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AL365496.1-201ENST00000426885 215 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 CACYBPP2-201ENST00000453625 678 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC233702.1-201ENST00000482905 502 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC104136.1-201ENST00000512969 394 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 LRRC34P2-201ENST00000514850 553 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.64□□□□□ -1.67
USP35Q9P2H5 NDUFB9P3-201ENST00000521269 501 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.64□□□□□ -1.67
USP35Q9P2H5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.64□□□□□ -1.67
USP35Q9P2H5 H3F3AP1-201ENST00000559984 334 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.64□□□□□ -1.67
USP35Q9P2H5 MIR5004-201ENST00000579078 107 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 MIR5692A1-201ENST00000580523 69 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 MIR4276-201ENST00000584832 70 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 BNIP3P30-201ENST00000601184 574 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC025165.5-201ENST00000602802 578 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AL033523.1-201ENST00000605153 153 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP35Q9P2H5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.64□□□□□ -1.67
USP35Q9P2H5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP35Q9P2H5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP35Q9P2H5 MAPK10-362ENST00000641864 4484 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 AC027514.1-201ENST00000588561 1603 ntBASIC4.64□□□□□ -1.67
USP35Q9P2H5 HSPA8P4-201ENST00000511877 1920 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms