Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC005046.1-201ENST00000608515 625 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC090132.2-201ENST00000615881 347 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC139792.3-201ENST00000623525 224 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AC009161.2-201ENST00000624626 138 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NDE1Q9NXR1 AP003122.5-201ENST00000527668 3766 ntBASIC2.72□□□□□ -1.97
NDE1Q9NXR1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC096644.4-201ENST00000563417 2912 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 SNORA62.1-201ENST00000364287 154 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 SNORD115-47-201ENST00000391226 86 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL356057.2-201ENST00000403318 432 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL591416.1-201ENST00000404015 867 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL590002.1-201ENST00000406554 418 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 RNU2-39P-201ENST00000410604 198 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 RNA5SP38-201ENST00000410750 119 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL451054.2-201ENST00000420896 202 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC006512.1-201ENST00000468816 291 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 RN7SL432P-201ENST00000484057 298 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC019235.1-201ENST00000503847 207 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC009901.1-201ENST00000506703 541 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL359273.1-201ENST00000510918 627 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 TTC39CP1-201ENST00000512513 755 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC090136.1-201ENST00000520009 240 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 OR5B19P-201ENST00000531766 928 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC007458.1-201ENST00000542812 373 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC136619.2-201ENST00000563361 631 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AP003465.2-201ENST00000602571 373 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC012507.3-201ENST00000603556 477 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC092794.1-201ENST00000612734 582 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC093648.1-201ENST00000623546 606 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AL160394.1-201ENST00000624765 724 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 AC073346.2-201ENST00000624724 2058 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
NDE1Q9NXR1 ZNF680P1-201ENST00000436625 1469 ntBASIC2.71□□□□□ -1.98
NDE1Q9NXR1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 MTCO1P12-201ENST00000414273 1543 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 RNU4-12P-201ENST00000365233 139 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 RNU6-946P-201ENST00000383878 107 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 SNORA9-201ENST00000384215 133 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 U3.19-201ENST00000390893 196 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC092809.3-201ENST00000415453 231 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 BTF3L4P3-201ENST00000418879 476 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 HMGN2P30-201ENST00000423237 256 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 ELOCP14-201ENST00000428070 331 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 MED13P1-201ENST00000428342 171 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 HMGN2P31-201ENST00000432430 273 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 HMGB3P12-201ENST00000438745 556 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 ELOCP7-201ENST00000439968 331 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 NEFMP1-201ENST00000443423 1006 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC079781.2-201ENST00000446424 169 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 RPS29P15-201ENST00000458329 171 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 RPS20P20-201ENST00000460498 340 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AL121769.1-201ENST00000469473 401 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 RN7SL293P-201ENST00000481765 281 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AF213884.2-201ENST00000510417 903 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC011352.1-201ENST00000512300 793 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 OR4R1P-201ENST00000529879 463 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AC024619.4-201ENST00000580924 316 ntBASIC2.7□□□□□ -1.98
NDE1Q9NXR1 AP001029.3-201ENST00000588063 596 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms