Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 RNU6-920P-201ENST00000410926 92 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC023141.4-201ENST00000412031 328 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC104651.1-201ENST00000427559 735 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 HMGB1P27-201ENST00000431429 603 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 RPS15AP27-201ENST00000449183 343 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AL513124.1-201ENST00000450410 614 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 BZW1P2-201ENST00000473537 826 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 ANXA2P1-201ENST00000505539 926 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 RN7SKP24-201ENST00000515888 284 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 RNA5SP165-201ENST00000517142 115 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC022634.1-201ENST00000520765 532 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AP002770.2-201ENST00000543613 532 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 GLYCAM1-201ENST00000546596 285 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 ARL2BPP2-201ENST00000550907 489 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 RPS3AP4-201ENST00000555161 764 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AL359212.1-201ENST00000556608 614 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC025281.1-201ENST00000567026 265 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC090616.3-201ENST00000582184 217 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 WISP1-OT1-201ENST00000602893 642 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC006338.1-201ENST00000618453 749 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 AC091953.2-201ENST00000623979 160 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 CU459211.1-201ENST00000635667 749 ntBASIC2.63□□□□□ -1.99
HPS4Q9NQG7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HPS4Q9NQG7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 RNU6-553P-201ENST00000364047 96 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 RN7SKP226-201ENST00000364912 300 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 RNU5A-2P-201ENST00000384337 116 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 RNU2-36P-201ENST00000410361 191 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 USP9YP20-201ENST00000419224 558 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL365203.2-201ENST00000423444 196 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 RAC1P6-201ENST00000423911 575 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 ISCA1P1-201ENST00000426679 387 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 GPM6BP2-201ENST00000432046 144 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC009296.1-201ENST00000443146 155 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 GPM6BP1-201ENST00000446387 144 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC011753.1-201ENST00000451001 220 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 FABP5P15-201ENST00000453566 214 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 SNORD97-201ENST00000459187 142 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 RPL37P6-201ENST00000460682 294 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 YWHAEP4-201ENST00000505390 198 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 NDUFB4P2-201ENST00000509515 391 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 MTND1P22-201ENST00000510572 951 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC109446.2-201ENST00000567872 497 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL356280.1-201ENST00000603614 379 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC135507.1-201ENST00000607214 561 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC103710.2-201ENST00000609912 942 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AC122133.1-201ENST00000613964 233 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.62□□□□□ -1.99
HPS4Q9NQG7 CR381653.2-201ENST00000624041 768 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 MIR203B-201ENST00000636080 86 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 U2.21-201ENST00000637295 81 ntBASIC2.62□□□□□ -1.99
HPS4Q9NQG7 ZNF658B-202ENST00000615961 3375 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HPS4Q9NQG7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HPS4Q9NQG7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HPS4Q9NQG7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HPS4Q9NQG7 RNU6-778P-201ENST00000363269 103 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 RNU6-511P-201ENST00000363496 107 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 RNU5F-7P-201ENST00000363696 115 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 SNORA25.6-201ENST00000364121 118 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 AL021407.1-201ENST00000404531 386 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 Y_RNA.608-201ENST00000410647 95 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 RNU2-68P-201ENST00000410878 191 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.61□□□□□ -1.99
HPS4Q9NQG7 Z99497.1-201ENST00000421282 135 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.61□□□□□ -1.99
HPS4Q9NQG7 AC006366.1-201ENST00000422002 759 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 SKA2P1-201ENST00000425592 390 ntBASIC2.61□□□□□ -1.99
HPS4Q9NQG7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms