Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.1□□□□□ -2.39
CDH23Q9H251 AC119618.1-201ENST00000434191 222 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.1□□□□□ -2.39
CDH23Q9H251 AL158211.1-201ENST00000566763 763 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.1□□□□□ -2.39
CDH23Q9H251 GDI2P1-201ENST00000429312 1336 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CDH23Q9H251 MIR618-201ENST00000385287 98 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 AL117342.1-201ENST00000404861 406 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 VPS26BP1-201ENST00000417155 755 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.1□□□□□ -2.39
CDH23Q9H251 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.1□□□□□ -2.39
CDH23Q9H251 AC093770.1-201ENST00000511559 571 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.1□□□□□ -2.39
CDH23Q9H251 MIR4305-201ENST00000583252 102 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 Y_RNA.804-201ENST00000615262 101 ntBASIC0.1□□□□□ -2.39
CDH23Q9H251 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
CDH23Q9H251 Y_RNA.288-201ENST00000364854 92 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 SNORA79B-201ENST00000410557 148 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 RPS26P56-201ENST00000444468 240 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.09□□□□□ -2.39
CDH23Q9H251 AC016717.1-201ENST00000448918 286 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 RNU6-1004P-201ENST00000516584 111 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 AC009509.4-201ENST00000619202 509 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 AC006249.1-201ENST00000621223 471 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.39
CDH23Q9H251 RNU6-452P-201ENST00000384406 107 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 RPL22P13-201ENST00000493291 347 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 SCARNA16.5-201ENST00000517114 183 ntBASIC0.09□□□□□ -2.39
CDH23Q9H251 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.09□□□□□ -2.39
CDH23Q9H251 BPY2DP-201ENST00000422208 265 ntBASIC0.09□□□□□ -2.4
CDH23Q9H251 AC027575.1-201ENST00000481064 460 ntBASIC0.09□□□□□ -2.4
CDH23Q9H251 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.09□□□□□ -2.4
CDH23Q9H251 AP001893.2-201ENST00000526949 202 ntBASIC0.09□□□□□ -2.4
CDH23Q9H251 MTND4P16-201ENST00000466108 1367 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
CDH23Q9H251 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.08□□□□□ -2.4
CDH23Q9H251 AL135752.1-201ENST00000479477 471 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.08□□□□□ -2.4
CDH23Q9H251 Y_RNA.495-201ENST00000384435 112 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 BTF3L4P2-201ENST00000392798 346 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.08□□□□□ -2.4
CDH23Q9H251 RPS26P55-201ENST00000471178 356 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.08□□□□□ -2.4
CDH23Q9H251 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CDH23Q9H251 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.08□□□□□ -2.4
CDH23Q9H251 AL162730.1-201ENST00000605734 292 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.08□□□□□ -2.4
CDH23Q9H251 U4.2-201ENST00000618561 85 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 AC087884.1-201ENST00000469738 328 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 HMGB1P46-201ENST00000520062 610 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.08□□□□□ -2.4
CDH23Q9H251 MIR8065-201ENST00000620577 100 ntBASIC0.08□□□□□ -2.4
CDH23Q9H251 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CDH23Q9H251 RNU6-348P-201ENST00000384386 107 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
CDH23Q9H251 AC009518.2-201ENST00000418056 731 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.07□□□□□ -2.4
CDH23Q9H251 AL034418.1-201ENST00000448675 860 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.07□□□□□ -2.4
CDH23Q9H251 SCARNA11.3-201ENST00000517276 130 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 RNY1P9-201ENST00000532431 109 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 AC015849.6-201ENST00000605454 474 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.07□□□□□ -2.4
CDH23Q9H251 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CDH23Q9H251 RNU2-64P-201ENST00000411315 191 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CDH23Q9H251 MTND4LP11-201ENST00000422184 280 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.07□□□□□ -2.4
CDH23Q9H251 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.07□□□□□ -2.4
CDH23Q9H251 AC244023.1-201ENST00000426884 112 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.07□□□□□ -2.4
CDH23Q9H251 AC242498.1-201ENST00000604134 111 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 AC243994.1-201ENST00000618627 109 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 AC123767.1-202ENST00000620407 817 ntBASIC0.07□□□□□ -2.4
CDH23Q9H251 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CDH23Q9H251 RNU6-1180P-201ENST00000364935 107 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.06□□□□□ -2.4
CDH23Q9H251 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.06□□□□□ -2.4
CDH23Q9H251 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.06□□□□□ -2.4
CDH23Q9H251 AC021171.1-201ENST00000603137 706 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 FRG1HP-204ENST00000617940 757 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 Y_RNA.100-201ENST00000363141 102 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 SNORD49B-201ENST00000365172 72 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 XKRYP1-201ENST00000423438 492 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 RPS6P14-201ENST00000425165 719 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.06□□□□□ -2.4
CDH23Q9H251 XKRYP2-201ENST00000432915 492 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 RPL23AP6-201ENST00000446637 472 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CDH23Q9H251 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.06□□□□□ -2.4
CDH23Q9H251 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CDH23Q9H251 Y_RNA.468-201ENST00000384298 102 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 MT-TQ-201ENST00000387372 72 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 CCNG1P1-201ENST00000406783 885 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.06□□□□□ -2.4
CDH23Q9H251 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CDH23Q9H251 AC130454.1-201ENST00000622948 401 ntBASIC0.06□□□□□ -2.4
CDH23Q9H251 RPS26P45-201ENST00000471748 340 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms