Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RN7SKP60-201ENST00000516985 239 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RNU6-840P-201ENST00000517275 65 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 OR5D17P-201ENST00000531492 978 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 OR4H12P-201ENST00000556269 907 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 MIR4286-201ENST00000580651 93 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC053481.4-201ENST00000583164 216 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC005899.2-201ENST00000584353 90 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AL512605.2-201ENST00000592972 256 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC078899.3-201ENST00000599065 212 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 ELOCP5-201ENST00000604924 333 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AL365434.2-201ENST00000607979 234 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.28□□□□□ -1.73
RNF38Q9H0F5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 RNU6-45P-201ENST00000384471 107 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 RNU4-70P-201ENST00000384579 139 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AL160275.3-201ENST00000423876 471 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AL358472.1-201ENST00000431295 329 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AL591704.1-201ENST00000432574 275 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AL353997.1-201ENST00000432936 108 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 TBCAP1-201ENST00000436520 327 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC099799.1-201ENST00000439809 192 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 OSTCP8-201ENST00000445117 448 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 SNRPGP5-201ENST00000456003 220 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC112492.4-201ENST00000456549 352 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC018437.1-201ENST00000492214 406 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 SNORA31.8-201ENST00000516327 108 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 RNU2-58P-201ENST00000516403 183 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 MED28P6-201ENST00000558776 231 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 RN7SL703P-201ENST00000578485 302 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC006130.2-201ENST00000586202 326 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 AC104763.2-201ENST00000604179 382 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 MIR8062-201ENST00000621515 85 ntBASIC4.27□□□□□ -1.73
RNF38Q9H0F5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF38Q9H0F5 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC015813.6-201ENST00000624409 5808 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.152-201ENST00000363578 100 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 SNORD74.4-201ENST00000364129 80 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 HMGB1P9-201ENST00000429856 646 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC146944.2-203ENST00000502493 354 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC020593.1-201ENST00000507399 299 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC139495.1-202ENST00000513164 354 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 GMPSP1-201ENST00000514075 579 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 RNU6-475P-201ENST00000516073 104 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 Y_RNA.680-201ENST00000516441 93 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 IFITM8P-201ENST00000522529 394 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC100770.1-201ENST00000532310 322 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC025946.2-201ENST00000603398 234 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AL021879.1-201ENST00000611756 288 ntBASIC4.26□□□□□ -1.73
RNF38Q9H0F5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF38Q9H0F5 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF38Q9H0F5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms