Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 FTO-222ENST00000637969 2889 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF355P-201ENST00000427301 3216 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC110926.1-201ENST00000412499 2825 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MAX-203ENST00000341653 330 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP46-201ENST00000362370 120 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORD114-10-201ENST00000363409 72 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA38-201ENST00000363946 132 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 VTRNA1-2-201ENST00000365241 89 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-317P-201ENST00000384031 107 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA27-201ENST00000384323 126 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA41B-201ENST00000384785 128 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR138-2-201ENST00000384916 84 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 COX6A1P3-201ENST00000404167 293 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC019205.3-201ENST00000424573 156 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 PLA2G12AP2-201ENST00000424744 264 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AL590762.4-201ENST00000425885 253 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SALL1P1-201ENST00000438101 3837 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL23AP6-201ENST00000446637 472 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RPS29P5-201ENST00000452777 171 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORD65B-201ENST00000459126 73 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL19P-201ENST00000462522 306 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL259P-201ENST00000478499 253 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL182P-201ENST00000496499 300 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RPS29P11-201ENST00000496507 171 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC113208.1-201ENST00000497944 318 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AL445187.1-201ENST00000502685 260 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SCGB1D5P-201ENST00000515134 247 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA31.16-201ENST00000516773 139 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU7-35P-201ENST00000517174 62 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC136777.2-201ENST00000522979 358 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 OR5BK1P-201ENST00000550421 823 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AL049869.4-201ENST00000555669 178 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR4793-201ENST00000577502 87 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR5192-201ENST00000579892 92 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR1273F-201ENST00000580581 99 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC008385.1-201ENST00000604421 355 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC048344.3-201ENST00000605512 251 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR6127-201ENST00000614019 109 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR8075-201ENST00000614354 80 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC131238.1-201ENST00000617135 328 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC068234.2-201ENST00000619646 522 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC103564.3-201ENST00000621194 220 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AC016582.3-206ENST00000636547 207 ntBASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP4-4Q9BYR3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms