Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 MIR6862-1-201ENST00000613016 70 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 MIR6862-2-201ENST00000614755 70 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 MIR6129-201ENST00000616087 109 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 AL049767.1-202ENST00000637826 242 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AL022322.2-201ENST00000624072 20397 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC239868.2-201ENST00000564237 4527 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USB1Q9BQ65 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 RNU6-245P-201ENST00000384020 107 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 RNU6-476P-201ENST00000384726 107 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 SNORA26.5-201ENST00000391215 123 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 BPY2DP-201ENST00000422208 265 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 RPS12P17-201ENST00000438591 377 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 AL357134.1-201ENST00000445848 426 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 SNORA31.8-201ENST00000516327 108 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 AL589674.2-201ENST00000604304 337 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 U2.21-201ENST00000637295 81 ntBASIC5.03□□□□□ -1.6
USB1Q9BQ65 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
USB1Q9BQ65 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USB1Q9BQ65 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USB1Q9BQ65 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
USB1Q9BQ65 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USB1Q9BQ65 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USB1Q9BQ65 AC073073.2-201ENST00000609827 2578 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 RNU6-727P-201ENST00000363592 107 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 MIR325-201ENST00000385260 98 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 MIR549A-201ENST00000385268 96 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 RNU6-460P-201ENST00000391158 108 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 AC005042.1-201ENST00000393397 800 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 HMGB1P37-201ENST00000439613 609 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 snoU13.4-201ENST00000458916 104 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 RN7SL515P-201ENST00000463999 297 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 AC007215.1-201ENST00000464893 276 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.02□□□□□ -1.61
USB1Q9BQ65 RNA5SP76-201ENST00000516277 87 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 RNU6-1007P-201ENST00000516586 107 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 RNU2-12P-201ENST00000517216 168 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.02□□□□□ -1.61
USB1Q9BQ65 MIR3613-201ENST00000579844 87 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 AC005255.1-201ENST00000593748 216 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 IPO5P1-202ENST00000600039 287 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 AC083809.1-201ENST00000615051 472 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 MIR6134-201ENST00000617606 109 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 AP005431.1-201ENST00000618479 319 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 AL354798.1-201ENST00000622505 329 ntBASIC5.02□□□□□ -1.61
USB1Q9BQ65 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USB1Q9BQ65 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USB1Q9BQ65 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USB1Q9BQ65 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.02□□□□□ -1.61
USB1Q9BQ65 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USB1Q9BQ65 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.02□□□□□ -1.61
USB1Q9BQ65 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC010329.5-201ENST00000623497 2174 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 Y_RNA.287-201ENST00000364853 94 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 RNA5SP267-201ENST00000364893 126 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 FTH1P15-201ENST00000406984 280 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 TOMM22P1-201ENST00000418578 312 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 CRIP1P1-201ENST00000427567 185 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 RNU7-107P-201ENST00000459121 61 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 ABCC13-202ENST00000463099 3842 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC092991.1-201ENST00000477176 376 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC006539.1-201ENST00000481419 501 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 SCARNA8-201ENST00000515924 131 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms