Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.38□□□□□ -1.87
MEIS3Q99687 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.38□□□□□ -1.87
MEIS3Q99687 HMGB1P6-201ENST00000569046 646 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 MIR4319-201ENST00000577285 85 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 MTCO3P13-201ENST00000577757 781 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MEIS3Q99687 AC021646.1-201ENST00000605469 484 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 PART1_1.1-201ENST00000611761 217 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.38□□□□□ -1.87
MEIS3Q99687 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
MEIS3Q99687 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
MEIS3Q99687 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
MEIS3Q99687 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
MEIS3Q99687 MTND5P28-201ENST00000438005 1594 ntBASIC3.38□□□□□ -1.87
MEIS3Q99687 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MEIS3Q99687 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MEIS3Q99687 TAB3P1-202ENST00000452645 1634 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MEIS3Q99687 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MEIS3Q99687 RNA5SP258-201ENST00000362750 119 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 Y_RNA.255-201ENST00000364581 97 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 RNU6-996P-201ENST00000365438 107 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.37□□□□□ -1.87
MEIS3Q99687 RNU6-1227P-201ENST00000383981 107 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 RNU6-1304P-201ENST00000411374 106 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.37□□□□□ -1.87
MEIS3Q99687 YPEL5P1-201ENST00000419731 367 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AC005534.2-201ENST00000431047 433 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AL365400.1-201ENST00000431854 640 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 MTATP6P16-201ENST00000434543 526 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.37□□□□□ -1.87
MEIS3Q99687 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.37□□□□□ -1.87
MEIS3Q99687 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 RPL23AP31-201ENST00000456160 467 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 snoU13.8-201ENST00000458890 104 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 SNORD109B-201ENST00000458961 67 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 SNORD109A-201ENST00000459128 67 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AC021382.1-201ENST00000483523 359 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AL163973.1-201ENST00000484753 577 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 RNU6-1314P-201ENST00000517139 104 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AL355836.1-201ENST00000555951 870 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AC026464.5-201ENST00000562497 722 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AC012182.1-201ENST00000570133 895 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 MIR4742-201ENST00000581069 85 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AC010680.4-201ENST00000605334 543 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.37□□□□□ -1.87
MEIS3Q99687 AC103710.2-201ENST00000609912 942 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 MIR6864-201ENST00000617935 70 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 AL136313.1-201ENST00000624804 202 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
MEIS3Q99687 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MEIS3Q99687 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
MEIS3Q99687 MTND5P3-201ENST00000438536 1800 ntBASIC3.37□□□□□ -1.87
MEIS3Q99687 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 AL136964.1-201ENST00000622038 2990 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
MEIS3Q99687 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
MEIS3Q99687 AC062016.1-201ENST00000355719 319 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 RNU6-7-201ENST00000364784 107 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 RNU6-8-201ENST00000365467 107 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 RNU6-831P-201ENST00000384548 107 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 MIR19A-201ENST00000384878 82 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 MIR9-1-201ENST00000385198 89 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
MEIS3Q99687 U3.20-201ENST00000390909 217 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 SNORD37.1-201ENST00000390968 65 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 U3.26-201ENST00000391236 204 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.36□□□□□ -1.87
MEIS3Q99687 AL590004.1-201ENST00000405321 300 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 RNU6-373P-201ENST00000411247 98 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 USP9YP20-201ENST00000419224 558 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.36□□□□□ -1.87
MEIS3Q99687 RAC1P7-201ENST00000445367 377 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 NDUFS5P3-201ENST00000450668 321 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 MTND3P16-201ENST00000452205 344 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 Y_RNA.632-201ENST00000459189 102 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.36□□□□□ -1.87
MEIS3Q99687 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.36□□□□□ -1.87
MEIS3Q99687 RNU1-103P-201ENST00000516502 125 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 RNU6-1038P-201ENST00000516516 104 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.36□□□□□ -1.87
MEIS3Q99687 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.36□□□□□ -1.87
MEIS3Q99687 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.36□□□□□ -1.87
MEIS3Q99687 AC090615.1-201ENST00000577519 154 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.36□□□□□ -1.87
MEIS3Q99687 AC007687.1-201ENST00000602704 304 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 RPL23AP92-201ENST00000603609 255 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 AC105429.2-201ENST00000610567 517 ntBASIC3.36□□□□□ -1.87
MEIS3Q99687 AC245517.5-201ENST00000611529 162 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms