Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 RNU1-94P-201ENST00000362627 173 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 RN7SKP185-201ENST00000362813 326 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-20P-201ENST00000384106 107 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-376P-201ENST00000384731 106 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 MIR301A-201ENST00000385261 86 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 CTSL3P-202ENST00000412179 788 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 RPL34P20-201ENST00000442771 351 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 PRSS3P4-201ENST00000453323 162 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 RN7SL244P-201ENST00000493405 297 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-638P-201ENST00000516582 104 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 NDUFA5P6-201ENST00000542110 379 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 SRGNP1-201ENST00000603392 451 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 AC107294.1-201ENST00000609524 467 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 snoZ196.1-201ENST00000625269 89 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 U4.7-201ENST00000638126 106 ntBASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-879P-201ENST00000364328 108 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-17P-201ENST00000384245 107 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-18P-201ENST00000384527 107 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 MIR554-201ENST00000384874 96 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 TBCAP2-201ENST00000416175 326 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AP000907.1-201ENST00000428428 510 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 RPL12P39-201ENST00000455456 496 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 SUMO2P6-201ENST00000505273 288 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC008489.1-201ENST00000524271 483 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 TRAV37-201ENST00000553906 342 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 RN7SL690P-201ENST00000582087 240 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC010928.2-201ENST00000588017 287 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AL645944.1-201ENST00000603857 493 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AL445567.2-201ENST00000618935 498 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC006001.4-201ENST00000622243 395 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 AC092376.2-201ENST00000622621 4116 ntBASIC4.94□□□□□ -1.62
CNTNAP3BQ96NU0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-227P-201ENST00000362865 103 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 Y_RNA.116-201ENST00000363292 103 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 Y_RNA.123-201ENST00000363338 102 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 SNORA70C-201ENST00000384538 135 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 SNORA12.1-201ENST00000390873 148 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 RPL11P3-201ENST00000395256 523 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 AL513331.1-201ENST00000411908 397 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 AC087588.1-201ENST00000462203 316 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 AC107027.2-201ENST00000512197 115 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 APOOP4-201ENST00000513530 597 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 MTND5P34-201ENST00000568888 325 ntBASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CNTNAP3BQ96NU0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms