Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL670379.5-201ENST00000605253 252 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 AL670379.12-201ENST00000605291 253 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 AL670379.8-201ENST00000605353 252 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 AL670379.7-201ENST00000605823 252 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 AL161734.1-201ENST00000609720 557 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 DUSP12P1-201ENST00000612874 516 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 MIR3651-201ENST00000630427 90 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 AC110994.2-201ENST00000635481 492 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 MIR7515-201ENST00000637837 67 ntBASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PDLIM5Q96HC4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RNU5A-6P-201ENST00000384136 116 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RPL23AP32-201ENST00000395315 459 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RPS3AP36-201ENST00000398190 775 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AL138885.1-201ENST00000405921 675 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 MTND3P17-201ENST00000416968 344 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AC104850.1-201ENST00000435940 476 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AC073614.1-201ENST00000438690 650 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 DPPA3P1-201ENST00000448050 469 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 GSTA11P-201ENST00000452866 669 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RNU6-953P-201ENST00000459154 107 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RPS27AP10-201ENST00000496103 208 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RNU1-103P-201ENST00000516502 125 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 SCARNA13-201ENST00000516672 275 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 MTND1P5-201ENST00000517906 940 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AC007151.1-201ENST00000572774 483 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 MIR3167-201ENST00000579623 85 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 OR1M4P-201ENST00000589199 287 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AC012468.1-201ENST00000604888 430 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 RPL23AP88-201ENST00000605759 454 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AC072046.2-201ENST00000618366 268 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AC136475.10-201ENST00000620253 385 ntBASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
PDLIM5Q96HC4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 RPL9P7-201ENST00000330965 580 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 RNU5E-1-201ENST00000362477 120 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 RNY4P16-201ENST00000364768 94 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 PIGFP2-201ENST00000421400 651 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 RAC1P6-201ENST00000423911 575 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC079448.1-201ENST00000449377 373 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC010587.1-201ENST00000505809 469 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 HPRT1P3-201ENST00000539521 576 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 RPS3AP4-201ENST00000555161 764 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 NRBF2P1-201ENST00000587407 859 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AL022154.1-201ENST00000604698 785 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC107871.2-201ENST00000612894 502 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 AC099654.12-201ENST00000639868 649 ntBASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PDLIM5Q96HC4 ASNSP3-201ENST00000451989 1306 ntBASIC2.79□□□□□ -1.96
PDLIM5Q96HC4 ADAM3A-203ENST00000461344 2157 ntBASIC2.79□□□□□ -1.96
PDLIM5Q96HC4 RNU6-512P-201ENST00000364438 103 ntBASIC2.79□□□□□ -1.96
PDLIM5Q96HC4 RNY3P13-201ENST00000365542 102 ntBASIC2.79□□□□□ -1.96
PDLIM5Q96HC4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM5Q96HC4 SNORA26.7-201ENST00000391288 122 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms