Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC008269.2-201ENST00000561915 1105 ntBASIC4.46□□□□□ -1.7
DDX11Q96FC9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.46□□□□□ -1.7
DDX11Q96FC9 AC005014.2-201ENST00000607795 599 ntBASIC4.46□□□□□ -1.7
DDX11Q96FC9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.46□□□□□ -1.7
DDX11Q96FC9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
DDX11Q96FC9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
DDX11Q96FC9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DDX11Q96FC9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DDX11Q96FC9 ZNF807-201ENST00000328088 1707 ntBASIC4.46□□□□□ -1.7
DDX11Q96FC9 MTND5P30-201ENST00000452896 1731 ntBASIC4.46□□□□□ -1.7
DDX11Q96FC9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX11Q96FC9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DDX11Q96FC9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX11Q96FC9 Y_RNA.149-201ENST00000363558 117 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 RNU6-1284P-201ENST00000363701 100 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 Y_RNA.252-201ENST00000364556 101 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 Y_RNA.333-201ENST00000365274 102 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 RNU6-946P-201ENST00000383878 107 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 RNU6-26P-201ENST00000383985 107 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 Y_RNA.473-201ENST00000384333 102 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 MIR199A2-201ENST00000385289 110 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 HMGN2P8-201ENST00000391458 268 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 HLFP1-201ENST00000402375 499 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 Y_RNA.618-201ENST00000410949 107 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 HMGB3P2-201ENST00000411913 584 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 RPL21P24-201ENST00000413752 448 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC244098.2-201ENST00000422068 99 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AL139247.1-201ENST00000422768 325 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 CBX3P6-201ENST00000430257 527 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 SNAP23P1-201ENST00000433229 246 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 RN7SL93P-201ENST00000463035 293 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 MTATP8P1-201ENST00000467115 207 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 RPS27AP1-201ENST00000475545 471 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 SNORA25.10-201ENST00000515926 124 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC100870.1-201ENST00000522035 505 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC090115.3-201ENST00000553218 849 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AL034351.1-201ENST00000605288 668 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC019176.2-201ENST00000611579 315 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AL442067.1-201ENST00000613261 223 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 PLCE1P1-201ENST00000622094 305 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 Z69720.2-201ENST00000624755 279 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC009093.8-201ENST00000641769 292 ntBASIC4.45□□□□□ -1.7
DDX11Q96FC9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX11Q96FC9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX11Q96FC9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX11Q96FC9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX11Q96FC9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DDX11Q96FC9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DDX11Q96FC9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 Y_RNA.47-201ENST00000362697 108 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 SNORD3E-201ENST00000362899 217 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 RNU6-263P-201ENST00000363811 107 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 U1.1-201ENST00000384101 164 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 Y_RNA.463-201ENST00000384271 102 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 RNU6-784P-201ENST00000384330 106 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 Y_RNA.557-201ENST00000384680 107 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 MIR450B-201ENST00000401182 78 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 CALM2P2-201ENST00000428512 440 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 snoU13.3-201ENST00000459441 104 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 CR383656.7-201ENST00000548164 174 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC073539.2-201ENST00000597113 165 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 AL391261.4-201ENST00000616012 481 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC084757.4-201ENST00000616350 526 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 AC007485.1-201ENST00000616755 206 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 AL589994.2-201ENST00000621124 579 ntBASIC4.44□□□□□ -1.7
DDX11Q96FC9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX11Q96FC9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX11Q96FC9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX11Q96FC9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX11Q96FC9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX11Q96FC9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms