Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 RNU6-595P-201ENST00000363944 107 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 SNORD14B-201ENST00000364533 90 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 RNU6-708P-201ENST00000384217 107 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 Y_RNA.518-201ENST00000384552 113 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 AL590762.2-201ENST00000395798 571 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 MIR921-201ENST00000401133 56 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 AL159987.2-201ENST00000432754 307 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 MTND2P29-201ENST00000438595 412 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 PHBP16-201ENST00000446318 950 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 HIGD1AP2-201ENST00000446367 280 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 FABP5P15-201ENST00000453566 214 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 AC026470.2-201ENST00000561492 181 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 AL390123.1-201ENST00000603216 237 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 AC130454.1-201ENST00000622948 401 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 MAPK10-303ENST00000641324 3959 ntBASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 MIR412-201ENST00000362142 91 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 RNU6-173P-201ENST00000364215 104 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 MIR607-201ENST00000385241 96 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 Z85995.1-201ENST00000415547 335 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 TMSB10P2-201ENST00000416049 131 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 AC087650.1-201ENST00000431445 468 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 MTND4LP30-201ENST00000454092 297 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 LINC01399-202ENST00000458450 244 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 MLLT10P2-201ENST00000506434 249 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 AL445567.2-201ENST00000618935 498 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 AC008785.1-201ENST00000624475 456 ntBASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.13□□□□□ -1.59
VTI1AQ96AJ9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 SNORA20.1-201ENST00000364790 130 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 AL359837.1-201ENST00000381357 287 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 Y_RNA.471-201ENST00000384312 102 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 MIR659-201ENST00000384963 97 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 MIR134-201ENST00000385258 73 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 RNU6-1093P-201ENST00000391194 107 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 RNU6-130P-201ENST00000411112 103 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 EIF4EP2-201ENST00000422816 654 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 SCARNA10-201ENST00000459255 330 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 RPL39P38-201ENST00000467018 153 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 RPL23AP45-201ENST00000476406 468 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 Y_RNA.673-201ENST00000516306 88 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 AP003733.2-201ENST00000529409 171 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 AC103996.1-201ENST00000555468 102 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 AMZ2P1-203ENST00000565833 850 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 RN7SL176P-201ENST00000580352 264 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 RPS29P30-201ENST00000600975 111 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.12□□□□□ -1.59
VTI1AQ96AJ9 MTND5P6-201ENST00000422338 1798 ntBASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 MTND5P9-201ENST00000503854 1755 ntBASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 AP000560.1-201ENST00000624150 1937 ntBASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 AC125257.1-201ENST00000560400 2930 ntBASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 OR51H2P-202ENST00000641424 3046 ntBASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VTI1AQ96AJ9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms