Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
RTN4IP1Q8WWV3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
RTN4IP1Q8WWV3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.85□□□□□ -2.11
RTN4IP1Q8WWV3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AL596028.1-201ENST00000326971 197 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 RNU6-501P-201ENST00000364072 100 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 RNU6-533P-201ENST00000384144 107 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 RNU6-301P-201ENST00000384277 107 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 SNORA51.11-201ENST00000384442 131 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC098614.2-201ENST00000426040 255 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 MTCYBP39-201ENST00000437562 491 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 PGBD4P3-201ENST00000440731 581 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 HIGD1AP2-201ENST00000446367 280 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 ART2BP-201ENST00000453501 499 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AL139824.2-201ENST00000458731 1095 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 MRPS17P3-201ENST00000465453 385 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC005178.1-201ENST00000508392 440 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 MRPS33P3-201ENST00000513456 322 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 RNA5SP290-201ENST00000517133 127 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 RN7SKP258-201ENST00000517151 304 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AP003122.3-201ENST00000526316 255 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 MTND4LP18-201ENST00000526864 291 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 ROCK1P1-201ENST00000573767 549 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC090616.2-202ENST00000584248 222 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 MIR548AB-201ENST00000584917 84 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AL161798.1-201ENST00000604630 131 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AL161729.4-201ENST00000604650 476 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC103710.2-201ENST00000609912 942 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC063944.3-201ENST00000609969 533 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AL360219.1-201ENST00000610230 366 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 AC006338.1-201ENST00000618453 749 ntBASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RTN4IP1Q8WWV3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
RTN4IP1Q8WWV3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 MTND4P1-201ENST00000457501 1466 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNA5SP289-201ENST00000362332 137 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNU6-1167P-201ENST00000363227 94 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNU1-52P-201ENST00000384190 164 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNU6-920P-201ENST00000410926 92 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 MTND1P23-201ENST00000416931 372 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AL353777.1-201ENST00000425552 326 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 ELOCP14-201ENST00000428070 331 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC018634.1-201ENST00000437554 401 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 ELOCP7-201ENST00000439968 331 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AL590365.1-201ENST00000450788 243 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AL133217.1-201ENST00000450980 425 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RPS3AP22-201ENST00000488297 769 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AL160314.1-201ENST00000490836 438 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC139453.3-201ENST00000493276 369 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNA5SP281-201ENST00000516504 135 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RNU6-201P-201ENST00000517100 61 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC002400.1-201ENST00000569310 726 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RPS15AP11-201ENST00000594193 385 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 KC877982.1-201ENST00000602313 470 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AL356280.1-201ENST00000603614 379 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AL022161.1-201ENST00000604390 213 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC107294.1-201ENST00000609524 467 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC245884.12-201ENST00000615364 59 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC009831.4-201ENST00000620744 325 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 AC006927.3-201ENST00000638789 384 ntBASIC1.83□□□□□ -2.12
RTN4IP1Q8WWV3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 UBE2L2-201ENST00000254302 429 ntBASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 Y_RNA.111-201ENST00000363248 100 ntBASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 RNU4-1-201ENST00000363925 141 ntBASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 RNU6-553P-201ENST00000364047 96 ntBASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 Y_RNA.245-201ENST00000364493 95 ntBASIC1.82□□□□□ -2.12
RTN4IP1Q8WWV3 SNORA6-201ENST00000384033 151 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms