Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORA31.3-201ENST00000516029 96 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 RNU6-496P-201ENST00000516145 99 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 RNU6-479P-201ENST00000516348 105 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 AC091144.1-201ENST00000519573 138 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 AL078605.1-201ENST00000603529 500 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 AC006077.1-201ENST00000604746 343 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 MIR6130-201ENST00000619419 109 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 AC007785.2-201ENST00000598627 1916 ntBASIC4.58□□□□□ -1.68
SHKBP1Q8TBC3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 SNORD113-8-201ENST00000363497 74 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 Y_RNA.240-201ENST00000364469 95 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 Y_RNA.324-201ENST00000365165 102 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RNU6-339P-201ENST00000384310 107 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RPL21P75-201ENST00000396599 483 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RPL21P28-201ENST00000401418 483 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 HSPE1P8-201ENST00000406997 288 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RN7SKP27-201ENST00000410684 333 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AL590556.1-201ENST00000423231 483 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC007389.2-201ENST00000434630 306 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RPL21P11-201ENST00000461458 483 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RPL21P39-201ENST00000463605 483 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC132942.1-201ENST00000486753 483 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC093591.1-201ENST00000491435 481 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RPL21P16-201ENST00000495531 483 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RNA5SP446-201ENST00000515955 82 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC106785.1-201ENST00000565935 262 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC120057.2-201ENST00000571520 271 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RPL23AP87-202ENST00000573039 466 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC091178.1-203ENST00000584586 279 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC123912.5-201ENST00000605470 343 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 AC034102.8-201ENST00000615146 484 ntBASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHKBP1Q8TBC3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RPL9P7-201ENST00000330965 580 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RNU6-290P-201ENST00000365212 101 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 Y_RNA.398-201ENST00000383952 99 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RNY3P4-201ENST00000384428 101 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AL353621.1-201ENST00000418219 243 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AL513043.1-201ENST00000439124 535 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RNU6-1037P-201ENST00000459571 107 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RPL9P9-202ENST00000466501 579 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 SNORD116-28-201ENST00000516123 91 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RNA5SP49-201ENST00000516450 115 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RNU6-914P-201ENST00000516749 109 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 RN7SKP258-201ENST00000517151 304 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 SNRPGP16-201ENST00000533275 226 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 MIR548AC-201ENST00000585049 88 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 AC104465.1-201ENST00000611365 139 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 MIR8059-201ENST00000620427 81 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 NEAT1-202ENST00000501122 22743 ntBASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHKBP1Q8TBC3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 MAPK10-253ENST00000641010 4072 ntBASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHKBP1Q8TBC3 Y_RNA.44-201ENST00000362676 108 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms