Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 AC134503.1-201ENST00000633048 54 ntBASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 TPTE2P4-201ENST00000258589 1605 ntBASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF548Q8NEK5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 GABPAP-201ENST00000419271 1356 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 MIR30E-201ENST00000362104 92 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 SNORA31-201ENST00000362607 130 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 Y_RNA.259-201ENST00000364619 101 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 SMIM11P1-201ENST00000369586 178 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1013P-201ENST00000384180 107 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 SNORD116-29-201ENST00000384516 83 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 MIR135A2-201ENST00000384854 100 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 RNU6-550P-201ENST00000391057 101 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 VN1R36P-201ENST00000414936 291 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC017079.2-201ENST00000416102 485 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 UBE2FP1-201ENST00000416536 447 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 RAC1P6-201ENST00000423911 575 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC008481.1-201ENST00000463278 396 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC083904.1-201ENST00000487828 231 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC104806.1-201ENST00000508720 308 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC108078.2-201ENST00000510750 236 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1038P-201ENST00000516516 104 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 SNORA31.20-201ENST00000517111 133 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AP000889.2-201ENST00000532684 490 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC126177.3-201ENST00000551839 688 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL121603.1-201ENST00000553815 142 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 OR11H5P-201ENST00000554039 926 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC008521.1-201ENST00000587471 187 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC012669.1-201ENST00000603209 283 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL670379.6-201ENST00000603753 252 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL670379.11-201ENST00000604059 253 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC008162.1-201ENST00000604718 254 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL670379.1-201ENST00000604752 252 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL670379.5-201ENST00000605253 252 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL670379.12-201ENST00000605291 253 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL670379.8-201ENST00000605353 252 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AL670379.7-201ENST00000605823 252 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 AC004696.1-201ENST00000614345 607 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 MIR7112-201ENST00000616126 65 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF548Q8NEK5 DDX10P1-201ENST00000448545 1933 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 MFSD8-233ENST00000641482 4860 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RNU6-600P-201ENST00000362524 99 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 Y_RNA.132-201ENST00000363421 102 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 Y_RNA.212-201ENST00000364177 102 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1181P-201ENST00000384191 106 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RNU6-43P-201ENST00000384302 107 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 NDUFB4P4-201ENST00000404822 243 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 MIR548K-201ENST00000408406 116 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RN7SKP111-201ENST00000410349 271 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC093106.2-201ENST00000428212 385 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 HMGB3P11-201ENST00000440127 604 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RNU7-152P-201ENST00000458982 64 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC010285.1-201ENST00000470580 392 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC010631.1-201ENST00000474150 156 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC012181.1-201ENST00000479895 423 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RPL21P93-201ENST00000480465 489 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RPL31P13-201ENST00000484151 370 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 FCF1P8-201ENST00000510322 597 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RNA5SP309-201ENST00000516670 106 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 RNU6-1088P-201ENST00000516850 104 ntBASIC3.38□□□□□ -1.87
ZNF548Q8NEK5 AC090136.1-201ENST00000520009 240 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms