Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC027807.1-201ENST00000559921 996 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC024619.4-201ENST00000580924 316 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL451007.1-201ENST00000595491 289 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC174048.1-201ENST00000603389 144 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC012507.3-201ENST00000603556 477 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AL021997.1-201ENST00000605757 193 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC107294.1-201ENST00000609524 467 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC025034.2-201ENST00000623264 286 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 MTND5P42-201ENST00000637720 498 ntBASIC2.94□□□□□ -1.94
CPSF7Q8N684 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF7Q8N684 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF7Q8N684 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CPSF7Q8N684 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CPSF7Q8N684 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 ZNF680P1-201ENST00000436625 1469 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CPSF7Q8N684 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC073325.2-201ENST00000339545 159 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CPSF7Q8N684 MIR422A-201ENST00000362286 90 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 SNORA62.1-201ENST00000364287 154 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 Y_RNA.245-201ENST00000364493 95 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 Y_RNA.409-201ENST00000383990 98 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 MIR454-201ENST00000390180 115 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 RPS12P24-201ENST00000412619 387 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC092809.3-201ENST00000415453 231 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CPSF7Q8N684 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 AL591212.2-201ENST00000433923 257 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 HIGD1AP11-201ENST00000438361 280 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 BNIP3P2-201ENST00000441221 577 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 RPL23AP20-201ENST00000447965 421 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 RNU6-420P-201ENST00000458780 107 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 SRRM1P2-201ENST00000464531 1192 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 MRPS17P3-201ENST00000465453 385 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC006512.1-201ENST00000468816 291 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 Y_RNA.689-201ENST00000516589 107 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 AP001893.2-201ENST00000526949 202 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 OR5AL2P-201ENST00000532185 920 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 MTCO3P13-201ENST00000577757 781 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AL161798.1-201ENST00000604630 131 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AL158032.1-201ENST00000605401 106 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC022893.3-201ENST00000607665 437 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AF250324.2-201ENST00000608299 610 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC130324.3-201ENST00000614165 542 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AL359880.1-201ENST00000621879 266 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC018692.3-201ENST00000623929 123 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 MTND5P17-201ENST00000418405 1603 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 AC027514.1-201ENST00000588561 1603 ntBASIC2.93□□□□□ -1.94
CPSF7Q8N684 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
CPSF7Q8N684 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CPSF7Q8N684 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 RNU6-61P-201ENST00000365528 109 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 RNU4-48P-201ENST00000365559 182 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 SNORA7.4-201ENST00000384249 137 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC068050.1-201ENST00000394891 380 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 CALM2P3-201ENST00000400429 449 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AL031779.1-201ENST00000415663 330 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 AL353193.1-201ENST00000421444 268 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC092047.1-201ENST00000424997 240 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 RPL21P40-201ENST00000428586 483 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 MTND3P21-201ENST00000433774 331 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 RPL39P36-201ENST00000490784 156 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 AP003033.1-201ENST00000527244 415 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 HMGB1P6-201ENST00000569046 646 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.92□□□□□ -1.94
CPSF7Q8N684 HSPE1P7-201ENST00000604681 321 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC004492.1-201ENST00000607036 742 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC107871.2-201ENST00000612894 502 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 AC139792.3-201ENST00000623525 224 ntBASIC2.92□□□□□ -1.94
CPSF7Q8N684 CR381653.2-201ENST00000624041 768 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms