Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 ZNF137P-201ENST00000456718 1920 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 RNU1-32P-201ENST00000363937 159 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.261-201ENST00000364631 102 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.441-201ENST00000384123 112 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 SNORD63-201ENST00000384262 68 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.586-201ENST00000391146 98 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AL096701.2-201ENST00000416920 238 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AL358453.1-201ENST00000422522 250 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AC245028.1-201ENST00000423259 256 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AC090774.1-201ENST00000435925 246 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 RPL30P1-201ENST00000488676 339 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 ANXA2P1-201ENST00000505539 926 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 RNA5SP272-201ENST00000516095 111 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 RNA5SP464-201ENST00000516251 108 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 MIR892C-201ENST00000516410 77 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 RNA5SP360-201ENST00000516555 118 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 HMGB1P14-201ENST00000557424 591 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 ATP5J2P6-201ENST00000565203 266 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AC104581.2-201ENST00000572227 430 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AC091178.1-203ENST00000584586 279 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 MTND1P7-201ENST00000632801 297 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 Z99571.1-201ENST00000636677 394 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 AC139769.1-204ENST00000472297 1931 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 PRO1804-201ENST00000623780 2050 ntBASIC4.17□□□□□ -1.74
ATG4DQ86TL0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.17□□□□□ -1.74
ATG4DQ86TL0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RNU6-1301P-201ENST00000362724 104 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.272-201ENST00000364696 102 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.488-201ENST00000384403 102 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.569-201ENST00000384749 103 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 MIR195-201ENST00000385194 87 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 SNORD56-201ENST00000413522 71 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RPL21P40-201ENST00000428586 483 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AL592045.1-201ENST00000429867 352 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RPS20P1-201ENST00000434853 354 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 TOMM22P6-201ENST00000465035 409 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RPS15AP34-201ENST00000487776 387 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 MIR2355-201ENST00000517199 87 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 IGKV1-32-201ENST00000519290 311 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AC008489.1-201ENST00000524271 483 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 TRAV37-201ENST00000553906 342 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RPL23AP78-201ENST00000599928 470 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RPL7P50-201ENST00000600588 727 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AC037487.3-201ENST00000606668 112 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RMST_4.1-201ENST00000616886 107 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 SAGE4P-201ENST00000442271 3381 ntBASIC4.16□□□□□ -1.74
ATG4DQ86TL0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATG4DQ86TL0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
ATG4DQ86TL0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.15□□□□□ -1.74
ATG4DQ86TL0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATG4DQ86TL0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATG4DQ86TL0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATG4DQ86TL0 AC135776.4-201ENST00000624300 1904 ntBASIC4.15□□□□□ -1.74
ATG4DQ86TL0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ATG4DQ86TL0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
ATG4DQ86TL0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.15□□□□□ -1.74
ATG4DQ86TL0 NEAT1-202ENST00000501122 22743 ntBASIC4.15□□□□□ -1.74
ATG4DQ86TL0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG4DQ86TL0 SNORA25.1-201ENST00000362326 128 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RNU6-153P-201ENST00000364422 104 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 SNORA71.2-201ENST00000364941 134 ntBASIC4.15□□□□□ -1.75
ATG4DQ86TL0 RNA5SP151-201ENST00000365632 117 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms