Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SH3RF1Q7Z6J0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 RNA5SP205-201ENST00000364653 136 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-843P-201ENST00000384454 104 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 RPL23AP36-201ENST00000413895 458 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 AC007395.1-201ENST00000451333 677 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 RNA5SP103-201ENST00000459503 118 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 SNORA72.7-201ENST00000516349 94 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 RNU7-110P-201ENST00000516891 62 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 AC107918.3-201ENST00000533272 382 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 MIR4282-201ENST00000583613 67 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 AC005005.4-201ENST00000623789 16698 ntBASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SH3RF1Q7Z6J0 AC233981.2-201ENST00000611524 1614 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.43-201ENST00000362670 111 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.82-201ENST00000363000 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 RNU5B-2P-201ENST00000363036 113 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.92-201ENST00000363043 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-879P-201ENST00000364328 108 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.235-201ENST00000364412 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-923P-201ENST00000364753 107 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.306-201ENST00000365015 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.312-201ENST00000365089 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.322-201ENST00000365151 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.343-201ENST00000365354 112 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 LAP3P1-201ENST00000403648 294 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 RNU4-30P-201ENST00000410245 143 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AC016700.2-201ENST00000446011 156 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 RPS5P7-201ENST00000456664 608 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.650-201ENST00000459002 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AL049874.1-201ENST00000489560 388 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 RPL21P129-201ENST00000491732 478 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.777-201ENST00000516982 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AC106785.1-201ENST00000565935 262 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 MIR5699-201ENST00000578903 90 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AC060766.3-201ENST00000591442 263 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.771-201ENST00000598668 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 VN1R85P-201ENST00000601587 426 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AL360181.4-201ENST00000621752 134 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.789-201ENST00000622480 102 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 MTND1P7-201ENST00000632801 297 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 AC009812.4-201ENST00000569134 1805 ntBASIC5.37□□□□□ -1.55
SH3RF1Q7Z6J0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 LINC01109-201ENST00000603837 3081 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-222P-201ENST00000362438 107 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 RNA5SP509-201ENST00000364577 119 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.441-201ENST00000384123 112 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 Y_RNA.568-201ENST00000384742 113 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 RNU6-131P-201ENST00000391144 107 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC114755.2-201ENST00000413520 361 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 CKS1BP5-201ENST00000434172 273 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 RPS15AP7-201ENST00000439294 405 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC124916.1-201ENST00000444020 547 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC133555.2-201ENST00000550213 292 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC022726.1-201ENST00000587475 207 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC091895.1-201ENST00000624494 256 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 AL445487.1-201ENST00000415694 1580 ntBASIC5.36□□□□□ -1.55
SH3RF1Q7Z6J0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms