Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.52□□□□□ -1.69
RUFY4Q6ZNE9 MIR6868-201ENST00000611215 58 ntBASIC4.52□□□□□ -1.69
RUFY4Q6ZNE9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RUFY4Q6ZNE9 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.52□□□□□ -1.69
RUFY4Q6ZNE9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RUFY4Q6ZNE9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RUFY4Q6ZNE9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC138393.1-203ENST00000327086 343 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.158-201ENST00000363651 101 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.404-201ENST00000383978 102 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-1032P-201ENST00000384100 107 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.463-201ENST00000384271 102 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-308P-201ENST00000390957 107 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AL158156.1-201ENST00000422509 473 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC091390.3-201ENST00000426478 338 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 HMGB1P9-201ENST00000429856 646 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AL358472.1-201ENST00000431295 329 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 USP9YP7-201ENST00000436723 430 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 NDUFB1P2-201ENST00000449477 176 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 USP9YP32-201ENST00000452432 430 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 MIR2053-201ENST00000459295 91 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC078817.1-201ENST00000492623 435 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC022493.1-201ENST00000492984 337 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 SNORA25.10-201ENST00000515926 124 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 MIR892C-201ENST00000516410 77 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 Vault.1-201ENST00000516474 102 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.720-201ENST00000517166 92 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 RNA5SP291-201ENST00000517222 105 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 TRAV37-201ENST00000553906 342 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 MIR5685-201ENST00000579080 79 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC011494.1-201ENST00000596454 237 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AP000787.2-201ENST00000604432 568 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 NUTF2P8-201ENST00000604593 363 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 ELOCP5-201ENST00000604924 333 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC007938.3-201ENST00000604965 623 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AC091925.1-201ENST00000623204 462 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 MAPK10-253ENST00000641010 4072 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 AL359693.1-201ENST00000614959 2407 ntBASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RUFY4Q6ZNE9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 MIR412-201ENST00000362142 91 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.148-201ENST00000363557 117 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.245-201ENST00000364493 95 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-741P-201ENST00000383889 107 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 SNORA41-201ENST00000384675 132 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 RNU2-33P-201ENST00000410344 192 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 RAC1P3-201ENST00000416129 580 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC097713.2-201ENST00000430199 356 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 RPL21P23-201ENST00000446654 460 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC006517.1-201ENST00000480485 328 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC011005.2-201ENST00000487324 359 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC078918.1-201ENST00000498515 228 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-470P-201ENST00000515954 104 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 IGKV2-23-201ENST00000518729 323 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC091516.1-201ENST00000549191 703 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC107016.1-201ENST00000550463 337 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AL591516.1-201ENST00000611326 274 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 AC092608.2-201ENST00000624427 218 ntBASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RUFY4Q6ZNE9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 MTND5P30-201ENST00000452896 1731 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms