Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCRAQ6ISU1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCRAQ6ISU1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCRAQ6ISU1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCRAQ6ISU1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCRAQ6ISU1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCRAQ6ISU1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCRAQ6ISU1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 RNU6-899P-201ENST00000363947 107 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 U3.10-201ENST00000364459 214 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 RNU6-356P-201ENST00000384140 107 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 U3.37-201ENST00000408528 213 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 RNU2-68P-201ENST00000410878 191 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 NDUFB4P7-201ENST00000423198 363 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 RPEP3-201ENST00000425462 676 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 AL512844.2-201ENST00000433990 593 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 RNU6-1211P-201ENST00000459179 105 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 AL132838.2-201ENST00000492041 314 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 PDCD5P2-201ENST00000507570 312 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 RNA5SP291-201ENST00000517222 105 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 AC107016.1-201ENST00000550463 337 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 AL161713.1-201ENST00000555538 145 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 DNAJC19P2-201ENST00000593340 302 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 AC008873.1-201ENST00000625051 138 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 AC004076.2-201ENST00000620532 3323 ntBASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCRAQ6ISU1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 RNU6-1298P-201ENST00000362456 101 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 RNA5SP28-201ENST00000363841 119 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 MIR1290-201ENST00000408735 78 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 BTF3P11-201ENST00000426582 477 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AC243964.1-201ENST00000441814 261 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 RPL23AP56-201ENST00000460778 453 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 MLLT10P2-201ENST00000506434 249 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AC004825.2-201ENST00000616634 455 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCRAQ6ISU1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTCRAQ6ISU1 RNA5SP509-201ENST00000364577 119 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 RNU4-11P-201ENST00000365287 132 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 MIR589-201ENST00000385238 99 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 SNORA77-201ENST00000408716 125 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 RNA5SP31-201ENST00000411144 127 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 PTGES3P4-201ENST00000426243 356 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 Z82210.1-201ENST00000440037 231 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AC023424.1-201ENST00000496058 459 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AC020593.1-201ENST00000507399 299 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AC107027.2-201ENST00000512197 115 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 SNORA25.12-201ENST00000516202 82 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AP004607.1-201ENST00000524456 203 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AL670379.2-201ENST00000604983 252 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 ZYXP1-201ENST00000617638 118 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AC024581.2-201ENST00000619986 252 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 CR381572.2-201ENST00000624852 397 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AC093535.2-201ENST00000624769 2326 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 AC140134.1-201ENST00000511830 3544 ntBASIC5.15□□□□□ -1.59
PTCRAQ6ISU1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms