Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 Z99497.1-201ENST00000421282 135 ntBASIC2.57□□□□□ -2
SRP54P61011 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.57□□□□□ -2
SRP54P61011 BRK1P2-201ENST00000442875 223 ntBASIC2.57□□□□□ -2
SRP54P61011 AL513328.1-201ENST00000446460 224 ntBASIC2.57□□□□□ -2
SRP54P61011 MTCO2P29-201ENST00000465212 189 ntBASIC2.57□□□□□ -2
SRP54P61011 AP000797.1-201ENST00000478870 387 ntBASIC2.57□□□□□ -2
SRP54P61011 AC139453.3-201ENST00000493276 369 ntBASIC2.57□□□□□ -2
SRP54P61011 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.57□□□□□ -2
SRP54P61011 AF131216.2-201ENST00000512316 564 ntBASIC2.57□□□□□ -2
SRP54P61011 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
SRP54P61011 AP003122.3-201ENST00000526316 255 ntBASIC2.57□□□□□ -2
SRP54P61011 AC084851.1-201ENST00000529105 249 ntBASIC2.57□□□□□ -2
SRP54P61011 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.57□□□□□ -2
SRP54P61011 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
SRP54P61011 AC012435.1-202ENST00000568772 240 ntBASIC2.57□□□□□ -2
SRP54P61011 MTATP6P24-201ENST00000576835 677 ntBASIC2.57□□□□□ -2
SRP54P61011 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.57□□□□□ -2
SRP54P61011 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
SRP54P61011 AC105129.3-201ENST00000605455 485 ntBASIC2.57□□□□□ -2
SRP54P61011 AC018638.7-201ENST00000605836 1114 ntBASIC2.57□□□□□ -2
SRP54P61011 RNU6-87P-201ENST00000607561 108 ntBASIC2.57□□□□□ -2
SRP54P61011 AL355816.2-201ENST00000610049 647 ntBASIC2.57□□□□□ -2
SRP54P61011 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SRP54P61011 AC079248.2-201ENST00000623779 326 ntBASIC2.57□□□□□ -2
SRP54P61011 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
SRP54P61011 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
SRP54P61011 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.57□□□□□ -2
SRP54P61011 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
SRP54P61011 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SRP54P61011 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP54P61011 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP54P61011 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.56□□□□□ -2
SRP54P61011 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
SRP54P61011 RNU6-288P-201ENST00000363690 104 ntBASIC2.56□□□□□ -2
SRP54P61011 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.56□□□□□ -2
SRP54P61011 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
SRP54P61011 RNU6-301P-201ENST00000384277 107 ntBASIC2.56□□□□□ -2
SRP54P61011 MIR301A-201ENST00000385261 86 ntBASIC2.56□□□□□ -2
SRP54P61011 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRP54P61011 FCF1P10-201ENST00000407590 479 ntBASIC2.56□□□□□ -2
SRP54P61011 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.56□□□□□ -2
SRP54P61011 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.56□□□□□ -2
SRP54P61011 AL161651.1-201ENST00000440882 223 ntBASIC2.56□□□□□ -2
SRP54P61011 EEF1B2P7-201ENST00000451177 676 ntBASIC2.56□□□□□ -2
SRP54P61011 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.56□□□□□ -2
SRP54P61011 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.56□□□□□ -2
SRP54P61011 EIF4EP3-201ENST00000498782 656 ntBASIC2.56□□□□□ -2
SRP54P61011 AC008015.1-201ENST00000555505 465 ntBASIC2.56□□□□□ -2
SRP54P61011 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.56□□□□□ -2
SRP54P61011 MIR4435-1-201ENST00000582552 80 ntBASIC2.56□□□□□ -2
SRP54P61011 AL031775.1-201ENST00000607014 887 ntBASIC2.56□□□□□ -2
SRP54P61011 MTND4P35-201ENST00000604257 1375 ntBASIC2.56□□□□□ -2
SRP54P61011 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRP54P61011 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.55□□□□□ -2
SRP54P61011 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SRP54P61011 RNU5F-7P-201ENST00000363696 115 ntBASIC2.55□□□□□ -2
SRP54P61011 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRP54P61011 Y_RNA.534-201ENST00000384599 112 ntBASIC2.55□□□□□ -2
SRP54P61011 MTCYBP36-201ENST00000404146 440 ntBASIC2.55□□□□□ -2
SRP54P61011 RPS4XP7-201ENST00000406274 780 ntBASIC2.55□□□□□ -2
SRP54P61011 USP9YP6-201ENST00000413550 854 ntBASIC2.55□□□□□ -2
SRP54P61011 AC137499.1-201ENST00000427602 88 ntBASIC2.55□□□□□ -2
SRP54P61011 AL591704.1-201ENST00000432574 275 ntBASIC2.55□□□□□ -2
SRP54P61011 MICF-203ENST00000432679 129 ntBASIC2.55□□□□□ -2
SRP54P61011 AL591212.2-201ENST00000433923 257 ntBASIC2.55□□□□□ -2
SRP54P61011 UBE2D3P1-201ENST00000436669 444 ntBASIC2.55□□□□□ -2
SRP54P61011 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.55□□□□□ -2
SRP54P61011 NDUFB4P2-201ENST00000509515 391 ntBASIC2.55□□□□□ -2
SRP54P61011 RNU7-51P-201ENST00000516560 62 ntBASIC2.55□□□□□ -2
SRP54P61011 RNU6-232P-201ENST00000517144 64 ntBASIC2.55□□□□□ -2
SRP54P61011 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.55□□□□□ -2
SRP54P61011 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.55□□□□□ -2
SRP54P61011 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.55□□□□□ -2
SRP54P61011 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.55□□□□□ -2
SRP54P61011 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.55□□□□□ -2
SRP54P61011 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.55□□□□□ -2
SRP54P61011 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
SRP54P61011 AC073544.2-201ENST00000601155 540 ntBASIC2.55□□□□□ -2
SRP54P61011 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.55□□□□□ -2
SRP54P61011 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SRP54P61011 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
SRP54P61011 AC009878.1-201ENST00000621819 340 ntBASIC2.55□□□□□ -2
SRP54P61011 AC008993.2-201ENST00000631744 806 ntBASIC2.55□□□□□ -2
SRP54P61011 CU459211.1-201ENST00000635667 749 ntBASIC2.55□□□□□ -2
SRP54P61011 Z99571.1-201ENST00000636677 394 ntBASIC2.55□□□□□ -2
SRP54P61011 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SRP54P61011 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
SRP54P61011 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SRP54P61011 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.54□□□□□ -2
SRP54P61011 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.54□□□□□ -2
SRP54P61011 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.54□□□□□ -2
SRP54P61011 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SRP54P61011 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SRP54P61011 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.54□□□□□ -2
SRP54P61011 MIR6073-201ENST00000352083 89 ntBASIC2.54□□□□□ -2
SRP54P61011 RNU5E-5P-201ENST00000365379 116 ntBASIC2.54□□□□□ -2
SRP54P61011 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SRP54P61011 RNU6-190P-201ENST00000384154 102 ntBASIC2.54□□□□□ -2
SRP54P61011 TAS2R15P-201ENST00000390674 928 ntBASIC2.54□□□□□ -2
SRP54P61011 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms