Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-790P-201ENST00000384479 105 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-15P-201ENST00000384534 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-2-201ENST00000384627 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-29P-201ENST00000384637 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-9-201ENST00000384776 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-33P-201ENST00000384793 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 MIR3074-201ENST00000384885 81 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-1106P-201ENST00000390845 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 MRPL42P3-201ENST00000401492 326 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AL356057.3-201ENST00000402607 340 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 Y_RNA.623-201ENST00000411128 95 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC016397.1-201ENST00000412463 242 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 AC243428.1-201ENST00000421099 264 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 FTH1P6-201ENST00000430768 320 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RPL23AP50-201ENST00000434149 455 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 AL353748.1-201ENST00000440753 474 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 NDUFB1P2-201ENST00000449477 176 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 MTND5P22-201ENST00000458380 195 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC010469.1-201ENST00000463864 576 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC008571.1-201ENST00000467232 300 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 RPL21P13-201ENST00000488305 481 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC021146.2-201ENST00000504736 556 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.6□□□□□ -1.83
CLRN1P58418 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.6□□□□□ -1.83
CLRN1P58418 MRPL49P2-201ENST00000521066 465 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLRN1P58418 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 HMGB1P14-201ENST00000557424 591 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC109446.1-201ENST00000566172 220 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC053481.4-201ENST00000583164 216 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.6□□□□□ -1.83
CLRN1P58418 AL121917.1-203ENST00000605534 577 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.6□□□□□ -1.83
CLRN1P58418 RNU6-6P-201ENST00000606623 107 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AC006157.1-201ENST00000611750 366 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 AL445567.2-201ENST00000618935 498 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLRN1P58418 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.6□□□□□ -1.83
CLRN1P58418 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.6□□□□□ -1.83
CLRN1P58418 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLRN1P58418 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.6□□□□□ -1.83
CLRN1P58418 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.6□□□□□ -1.83
CLRN1P58418 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.59□□□□□ -1.83
CLRN1P58418 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
CLRN1P58418 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLRN1P58418 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.59□□□□□ -1.83
CLRN1P58418 AC016588.2-201ENST00000632484 3021 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
CLRN1P58418 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.59□□□□□ -1.83
CLRN1P58418 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.59□□□□□ -1.83
CLRN1P58418 Y_RNA.158-201ENST00000363651 101 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 RNA5SP167-201ENST00000365461 116 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 Y_RNA.364-201ENST00000365532 101 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 MIR493-201ENST00000385254 89 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 AL022722.2-201ENST00000402519 180 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 RNU4-6P-201ENST00000410804 122 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 RNU6-55P-201ENST00000411092 107 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 RNU6-325P-201ENST00000411132 105 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 RAC1P3-201ENST00000416129 580 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 AL096701.2-201ENST00000416920 238 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLRN1P58418 AL133396.1-201ENST00000432048 687 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLRN1P58418 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLRN1P58418 SNORA25.10-201ENST00000515926 124 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 RNU6-307P-201ENST00000516743 106 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 CYCSP29-201ENST00000533731 318 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 TRAV32-201ENST00000553993 340 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.59□□□□□ -1.83
CLRN1P58418 MIR4680-201ENST00000580906 66 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 AC005899.2-201ENST00000584353 90 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 AC093227.2-201ENST00000589357 285 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.59□□□□□ -1.83
CLRN1P58418 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.59□□□□□ -1.83
CLRN1P58418 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.59□□□□□ -1.83
CLRN1P58418 AC136601.2-201ENST00000604356 474 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 AC004805.2-201ENST00000605382 482 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 AL591516.1-201ENST00000611326 274 ntBASIC3.59□□□□□ -1.83
CLRN1P58418 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLRN1P58418 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLRN1P58418 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.59□□□□□ -1.84
CLRN1P58418 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CLRN1P58418 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLRN1P58418 ZNF807-201ENST00000328088 1707 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLRN1P58418 AC068254.2-201ENST00000623938 3577 ntBASIC3.58□□□□□ -1.84
CLRN1P58418 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLRN1P58418 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CLRN1P58418 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms