Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNA5SP276-201ENST00000362580 94 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 SNORA25B-201ENST00000365507 128 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 MIR518A2-201ENST00000384966 87 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 VN1R51P-201ENST00000411675 945 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 RPS20P15-201ENST00000412792 311 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 SNORD56-201ENST00000413522 71 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 AL449283.1-202ENST00000418249 604 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 TIMM9P2-201ENST00000419324 266 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN12P56749 USP9YP15-201ENST00000442391 422 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 AC096638.1-201ENST00000444678 216 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN12P56749 MTND1P31-201ENST00000449206 961 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN12P56749 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN12P56749 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN12P56749 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.55□□□□□ -2.16
CLDN12P56749 AC024589.1-201ENST00000512207 263 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 RNU6-390P-201ENST00000516259 103 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 AC023538.1-201ENST00000534576 736 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 NDUFA5P6-201ENST00000542110 379 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 HSBP1P1-201ENST00000555205 166 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.55□□□□□ -2.16
CLDN12P56749 AC012213.3-201ENST00000577199 777 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.55□□□□□ -2.16
CLDN12P56749 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.55□□□□□ -2.16
CLDN12P56749 AL356094.1-201ENST00000624663 1212 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.55□□□□□ -2.16
CLDN12P56749 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN12P56749 SNORA8-201ENST00000384574 139 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 RNA5SP508-201ENST00000411327 119 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN12P56749 AL356320.1-201ENST00000429616 163 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN12P56749 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN12P56749 IFNA20P-201ENST00000436840 528 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.54□□□□□ -2.16
CLDN12P56749 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLDN12P56749 BTBD7P2-201ENST00000441962 620 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN12P56749 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.54□□□□□ -2.16
CLDN12P56749 KATNBL1P6-201ENST00000453433 915 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 RPL21P99-201ENST00000480369 423 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 RPS29P11-201ENST00000496507 171 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 AC020699.1-201ENST00000505161 445 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 AC093809.1-201ENST00000509155 340 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.54□□□□□ -2.16
CLDN12P56749 DEFB131D-201ENST00000526803 184 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 PSMA3P-201ENST00000555485 635 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.54□□□□□ -2.16
CLDN12P56749 MIR1273D-201ENST00000577266 86 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN12P56749 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
CLDN12P56749 MIR6134-201ENST00000617606 109 ntBASIC1.54□□□□□ -2.16
CLDN12P56749 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CLDN12P56749 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.54□□□□□ -2.16
CLDN12P56749 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLDN12P56749 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLDN12P56749 RNU5E-1-201ENST00000362477 120 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 RPL21P24-201ENST00000413752 448 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 C1DP1-201ENST00000426049 402 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 SNRPEP7-201ENST00000438350 220 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.53□□□□□ -2.16
CLDN12P56749 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN12P56749 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN12P56749 AC010631.1-201ENST00000474150 156 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN12P56749 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AC034222.1-201ENST00000494052 532 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN12P56749 RNU5B-3P-201ENST00000516601 115 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AP000776.1-201ENST00000530032 1663 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AL512310.1-201ENST00000548639 172 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.53□□□□□ -2.16
CLDN12P56749 DEFB122-202ENST00000569013 197 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 MIR4435-1-201ENST00000582552 80 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AC010928.2-201ENST00000588017 287 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.53□□□□□ -2.16
CLDN12P56749 SNRPGP17-201ENST00000603780 214 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AC013470.4-201ENST00000619978 986 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 AC012150.2-201ENST00000621300 544 ntBASIC1.53□□□□□ -2.16
CLDN12P56749 TEX21P-201ENST00000447107 1476 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CLDN12P56749 Z98742.3-201ENST00000418637 326 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN12P56749 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN12P56749 RPS15AP9-201ENST00000439856 381 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 BRK1P2-201ENST00000442875 223 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDN12P56749 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN12P56749 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDN12P56749 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
CLDN12P56749 RPL38P4-201ENST00000502376 214 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 AC117522.2-201ENST00000510049 657 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 SNORA4.4-201ENST00000515921 135 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 SNORA31.3-201ENST00000516029 96 ntBASIC1.52□□□□□ -2.17
CLDN12P56749 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN12P56749 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.52□□□□□ -2.17
CLDN12P56749 AC021451.1-201ENST00000523498 1129 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms