Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU6-137P-201ENST00000363680 108 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 RNA5SP223-201ENST00000365174 120 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 RNU4-17P-201ENST00000365598 141 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 SNORD116-14-201ENST00000383894 92 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 SNORD116-17-201ENST00000383929 92 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 RNU6-356P-201ENST00000384140 107 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 SNORD116-15-201ENST00000384445 92 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 SNORD116-20-201ENST00000384529 92 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 SNORD116-19-201ENST00000384729 92 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF144AP50876 ELOCP19-201ENST00000411919 318 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 CYP4F29P-201ENST00000420685 446 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 RPL7AP25-201ENST00000423357 805 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 AC098614.2-201ENST00000426040 255 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 BTF3P11-201ENST00000426582 477 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 MTND4LP9-201ENST00000427694 174 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF144AP50876 RPS15AP5-201ENST00000436276 388 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 CR769767.1-201ENST00000436337 346 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF144AP50876 YWHAEP4-201ENST00000505390 198 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 AC091874.1-201ENST00000511402 339 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 RNU6-58P-201ENST00000517143 103 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF144AP50876 MIR3145-201ENST00000580727 82 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 RN7SL708P-201ENST00000580952 299 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 MIR3936-201ENST00000584304 110 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF144AP50876 AL138963.2-201ENST00000605137 226 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 AL008718.3-201ENST00000610217 321 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 U6.99-201ENST00000637524 83 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF144AP50876 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RNF144AP50876 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
RNF144AP50876 ASNSP1-201ENST00000518311 1939 ntBASIC4.81□□□□□ -1.64
RNF144AP50876 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF144AP50876 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF144AP50876 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RNF144AP50876 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF144AP50876 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF144AP50876 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RNF144AP50876 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 RNU1-43P-201ENST00000365052 165 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 U8.10-201ENST00000384260 133 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RNU6-171P-201ENST00000384354 107 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AL035079.1-201ENST00000405210 287 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RNU2-52P-201ENST00000410680 190 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RNU2-68P-201ENST00000410878 191 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RNU6-1245P-201ENST00000411130 106 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AC007738.1-201ENST00000413892 348 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RPL30P13-201ENST00000418873 348 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RPL7AP61-201ENST00000443410 636 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RNU6-1211P-201ENST00000459179 105 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AC009127.1-201ENST00000467090 155 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 SNRPCP2-201ENST00000504370 475 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF144AP50876 SNORD116-26-201ENST00000516006 96 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 SNORA43.2-201ENST00000516652 128 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 RNU6-1198P-201ENST00000516904 67 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AP006245.2-201ENST00000522004 300 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF144AP50876 AL161713.1-201ENST00000555538 145 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AC048347.1-201ENST00000624621 427 ntBASIC4.8□□□□□ -1.64
RNF144AP50876 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF144AP50876 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF144AP50876 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.8□□□□□ -1.64
RNF144AP50876 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.8□□□□□ -1.64
RNF144AP50876 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF144AP50876 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF144AP50876 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF144AP50876 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RNF144AP50876 MAPK10-304ENST00000641341 3984 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 SNORA51.1-201ENST00000363243 140 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 RNA5SP90-201ENST00000364801 99 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 SNORA67-201ENST00000384423 137 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 MTHFD2P2-201ENST00000407725 247 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 Y_RNA.595-201ENST00000410403 105 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 AC104333.2-201ENST00000422630 192 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF144AP50876 AC243964.1-201ENST00000441814 261 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 RPS20P10-201ENST00000451209 253 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 AC006026.2-201ENST00000457376 180 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 AC097462.2-201ENST00000504623 481 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF144AP50876 Y_RNA.797-201ENST00000515977 94 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 SNORA25.12-201ENST00000516202 82 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 Y_RNA.686-201ENST00000516548 134 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF144AP50876 AC007225.2-201ENST00000562529 256 ntBASIC4.79□□□□□ -1.64
RNF144AP50876 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms