Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.49□□□□□ -1.53
COL9A1P20849 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.48□□□□□ -1.53
COL9A1P20849 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL9A1P20849 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL9A1P20849 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL9A1P20849 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL9A1P20849 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.48□□□□□ -1.53
COL9A1P20849 AC068700.1-201ENST00000565862 3754 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL9A1P20849 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL9A1P20849 RNU1-62P-201ENST00000362599 164 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 RNU6-356P-201ENST00000384140 107 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 RNU1-136P-201ENST00000384181 164 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 MIR634-201ENST00000385208 97 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 Y_RNA.584-201ENST00000391090 114 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 RNA5SP251-201ENST00000410614 137 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.48□□□□□ -1.53
COL9A1P20849 CRYBB2P1-203ENST00000415709 538 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AC079780.1-201ENST00000428259 207 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AL590383.1-201ENST00000428602 75 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.48□□□□□ -1.53
COL9A1P20849 SNRPEP9-201ENST00000436794 238 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AL135790.2-201ENST00000437701 267 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AL714022.1-201ENST00000439897 151 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 RPL39P29-201ENST00000447779 157 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AL031737.1-201ENST00000450125 223 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 PRSS3P4-201ENST00000453323 162 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AC109327.1-201ENST00000471666 403 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.48□□□□□ -1.53
COL9A1P20849 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.48□□□□□ -1.53
COL9A1P20849 MIR3939-201ENST00000582614 106 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 MIR6853-201ENST00000619642 74 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 AL353796.1-201ENST00000561542 3241 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL9A1P20849 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.48□□□□□ -1.53
COL9A1P20849 AC020656.2-201ENST00000613291 5309 ntBASIC5.48□□□□□ -1.53
COL9A1P20849 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL9A1P20849 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL9A1P20849 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.47□□□□□ -1.53
COL9A1P20849 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL9A1P20849 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
COL9A1P20849 SNORD73B-201ENST00000364394 72 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 MIR153-1-201ENST00000384914 90 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 RPS20P14-201ENST00000412545 360 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 RPL26P27-201ENST00000414397 437 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 RNF10P1-201ENST00000418589 369 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.47□□□□□ -1.53
COL9A1P20849 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.47□□□□□ -1.53
COL9A1P20849 AC112498.1-201ENST00000444401 332 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 AC146507.2-201ENST00000460608 476 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 RPL23AP14-201ENST00000468281 468 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 SNRPGP7-201ENST00000469016 106 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 AC097484.1-201ENST00000471148 389 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 UQCRHP4-201ENST00000471686 272 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 SNORD116-26-201ENST00000516006 96 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 Y_RNA.692-201ENST00000516627 105 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 RNU6-703P-201ENST00000516946 107 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 RNU6-1183P-201ENST00000517054 60 ntBASIC5.47□□□□□ -1.53
COL9A1P20849 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.47□□□□□ -1.53
COL9A1P20849 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL9A1P20849 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL9A1P20849 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL9A1P20849 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.47□□□□□ -1.53
COL9A1P20849 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL9A1P20849 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL9A1P20849 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.46□□□□□ -1.53
COL9A1P20849 MAPK10-263ENST00000641052 4307 ntBASIC5.46□□□□□ -1.53
COL9A1P20849 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL9A1P20849 AC015813.6-201ENST00000624409 5808 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 SNORD56.1-201ENST00000362913 68 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 U3.9-201ENST00000363823 204 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 RNU6-1048P-201ENST00000364054 107 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL9A1P20849 RNU6-1264P-201ENST00000383891 107 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 SNORA36A-201ENST00000384221 132 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 MIR518D-201ENST00000385014 87 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 MIR548A3-201ENST00000385297 97 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 AL606845.1-201ENST00000404881 255 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL9A1P20849 AL591034.1-201ENST00000407447 340 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 MIR320B2-201ENST00000408479 138 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 RNU4-43P-201ENST00000410628 137 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.46□□□□□ -1.54
COL9A1P20849 AC012306.1-201ENST00000423267 114 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL9A1P20849 AL451050.1-201ENST00000450126 415 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 AP000705.1-201ENST00000454567 350 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.46□□□□□ -1.54
COL9A1P20849 MIR2116-201ENST00000517221 80 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 RNA5SP373-201ENST00000517271 95 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 RPL23AP53-201ENST00000521854 457 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 AP001781.1-201ENST00000530977 207 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.46□□□□□ -1.54
COL9A1P20849 IPO5P1-202ENST00000600039 287 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 AP000769.2-201ENST00000602344 396 ntBASIC5.46□□□□□ -1.54
COL9A1P20849 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.46□□□□□ -1.54
COL9A1P20849 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL9A1P20849 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.46□□□□□ -1.54
COL9A1P20849 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
COL9A1P20849 AC004076.2-201ENST00000620532 3323 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms