Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.68□□□□□ -1.82
RHOP08100 FABP5P13-201ENST00000452144 328 ntBASIC3.68□□□□□ -1.82
RHOP08100 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.68□□□□□ -1.82
RHOP08100 DYNLL1P5-201ENST00000467158 270 ntBASIC3.68□□□□□ -1.82
RHOP08100 VN1R17P-201ENST00000472048 1090 ntBASIC3.68□□□□□ -1.82
RHOP08100 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.68□□□□□ -1.82
RHOP08100 RNU6-840P-201ENST00000517275 65 ntBASIC3.68□□□□□ -1.82
RHOP08100 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.68□□□□□ -1.82
RHOP08100 AC008489.1-201ENST00000524271 483 ntBASIC3.68□□□□□ -1.82
RHOP08100 AL360157.1-201ENST00000565962 87 ntBASIC3.68□□□□□ -1.82
RHOP08100 FRG2DP-202ENST00000566967 323 ntBASIC3.68□□□□□ -1.82
RHOP08100 AC093249.1-201ENST00000567049 203 ntBASIC3.68□□□□□ -1.82
RHOP08100 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.68□□□□□ -1.82
RHOP08100 AC023043.2-201ENST00000589678 1026 ntBASIC3.68□□□□□ -1.82
RHOP08100 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.68□□□□□ -1.82
RHOP08100 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.68□□□□□ -1.82
RHOP08100 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
RHOP08100 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RHOP08100 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RHOP08100 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RHOP08100 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.67□□□□□ -1.82
RHOP08100 RNU6-254P-201ENST00000363377 107 ntBASIC3.67□□□□□ -1.82
RHOP08100 Y_RNA.135-201ENST00000363439 95 ntBASIC3.67□□□□□ -1.82
RHOP08100 Y_RNA.259-201ENST00000364619 101 ntBASIC3.67□□□□□ -1.82
RHOP08100 SNORD42.2-201ENST00000365570 69 ntBASIC3.67□□□□□ -1.82
RHOP08100 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 SNORD116-29-201ENST00000384516 83 ntBASIC3.67□□□□□ -1.82
RHOP08100 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RHOP08100 U3.19-201ENST00000390893 196 ntBASIC3.67□□□□□ -1.82
RHOP08100 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.67□□□□□ -1.82
RHOP08100 BTF3L4P3-201ENST00000418879 476 ntBASIC3.67□□□□□ -1.82
RHOP08100 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 MTCO1P39-201ENST00000426148 480 ntBASIC3.67□□□□□ -1.82
RHOP08100 AL669831.1-202ENST00000428504 417 ntBASIC3.67□□□□□ -1.82
RHOP08100 AC107399.1-201ENST00000451226 265 ntBASIC3.67□□□□□ -1.82
RHOP08100 Y_RNA.639-201ENST00000458981 102 ntBASIC3.67□□□□□ -1.82
RHOP08100 RNU7-152P-201ENST00000458982 64 ntBASIC3.67□□□□□ -1.82
RHOP08100 RNU6-953P-201ENST00000459154 107 ntBASIC3.67□□□□□ -1.82
RHOP08100 RNU7-167P-201ENST00000459160 62 ntBASIC3.67□□□□□ -1.82
RHOP08100 RPL7P43-201ENST00000478876 753 ntBASIC3.67□□□□□ -1.82
RHOP08100 RPS29P2-201ENST00000479278 136 ntBASIC3.67□□□□□ -1.82
RHOP08100 AP001086.1-201ENST00000494882 321 ntBASIC3.67□□□□□ -1.82
RHOP08100 AC093663.1-201ENST00000497190 394 ntBASIC3.67□□□□□ -1.82
RHOP08100 RNU6-559P-201ENST00000516151 98 ntBASIC3.67□□□□□ -1.82
RHOP08100 Y_RNA.682-201ENST00000516457 100 ntBASIC3.67□□□□□ -1.82
RHOP08100 RNU6-256P-201ENST00000516747 97 ntBASIC3.67□□□□□ -1.82
RHOP08100 RNU6-566P-201ENST00000516790 107 ntBASIC3.67□□□□□ -1.82
RHOP08100 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.67□□□□□ -1.82
RHOP08100 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 AC106782.4-201ENST00000568264 210 ntBASIC3.67□□□□□ -1.82
RHOP08100 APOOP1-201ENST00000604695 592 ntBASIC3.67□□□□□ -1.82
RHOP08100 AC110741.2-201ENST00000605278 268 ntBASIC3.67□□□□□ -1.82
RHOP08100 AL670379.4-201ENST00000605279 254 ntBASIC3.67□□□□□ -1.82
RHOP08100 YPEL5P2-201ENST00000605553 359 ntBASIC3.67□□□□□ -1.82
RHOP08100 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 AC006023.2-201ENST00000609916 167 ntBASIC3.67□□□□□ -1.82
RHOP08100 U2.17-201ENST00000611454 95 ntBASIC3.67□□□□□ -1.82
RHOP08100 AC048347.1-201ENST00000624621 427 ntBASIC3.67□□□□□ -1.82
RHOP08100 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.67□□□□□ -1.82
RHOP08100 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 AC004925.1-201ENST00000624256 2706 ntBASIC3.67□□□□□ -1.82
RHOP08100 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RHOP08100 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.67□□□□□ -1.82
RHOP08100 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.67□□□□□ -1.82
RHOP08100 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RHOP08100 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RHOP08100 RNU6-393P-201ENST00000384475 107 ntBASIC3.66□□□□□ -1.82
RHOP08100 SNORA48.2-201ENST00000390926 124 ntBASIC3.66□□□□□ -1.82
RHOP08100 RNA5SP219-201ENST00000390940 113 ntBASIC3.66□□□□□ -1.82
RHOP08100 SNORD70.1-201ENST00000391007 85 ntBASIC3.66□□□□□ -1.82
RHOP08100 AL360182.1-201ENST00000397433 468 ntBASIC3.66□□□□□ -1.82
RHOP08100 AL138878.1-201ENST00000405131 347 ntBASIC3.66□□□□□ -1.82
RHOP08100 MIR548F5-201ENST00000408421 86 ntBASIC3.66□□□□□ -1.82
RHOP08100 RN7SKP53-201ENST00000411337 315 ntBASIC3.66□□□□□ -1.82
RHOP08100 AC074085.1-201ENST00000413598 418 ntBASIC3.66□□□□□ -1.82
RHOP08100 AC080125.1-201ENST00000414888 684 ntBASIC3.66□□□□□ -1.82
RHOP08100 AC092809.3-201ENST00000415453 231 ntBASIC3.66□□□□□ -1.82
RHOP08100 RPLP0P7-201ENST00000416050 667 ntBASIC3.66□□□□□ -1.82
RHOP08100 AL353729.1-201ENST00000425044 720 ntBASIC3.66□□□□□ -1.82
RHOP08100 AC008264.1-201ENST00000447612 367 ntBASIC3.66□□□□□ -1.82
RHOP08100 MTND1P17-201ENST00000448961 204 ntBASIC3.66□□□□□ -1.82
RHOP08100 RPL9P32-201ENST00000464118 620 ntBASIC3.66□□□□□ -1.82
RHOP08100 AC106872.2-201ENST00000494303 480 ntBASIC3.66□□□□□ -1.82
RHOP08100 MTND5P5-201ENST00000503764 376 ntBASIC3.66□□□□□ -1.82
RHOP08100 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.66□□□□□ -1.82
RHOP08100 GMPSP1-201ENST00000514075 579 ntBASIC3.66□□□□□ -1.82
RHOP08100 RNU2-69P-201ENST00000516061 100 ntBASIC3.66□□□□□ -1.82
RHOP08100 Y_RNA.689-201ENST00000516589 107 ntBASIC3.66□□□□□ -1.82
RHOP08100 Y_RNA.718-201ENST00000517110 102 ntBASIC3.66□□□□□ -1.82
RHOP08100 RNA5SP454-201ENST00000517231 127 ntBASIC3.66□□□□□ -1.82
RHOP08100 IGKV2D-23-201ENST00000518179 286 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms