Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-1304P-201ENST00000411374 106 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AC073264.1-201ENST00000411508 416 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.91□□□□□ -1.94
COL2A1P02458 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.91□□□□□ -1.94
COL2A1P02458 AL035410.1-201ENST00000427409 427 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AC109583.1-201ENST00000432156 268 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AL606489.2-201ENST00000433886 234 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.91□□□□□ -1.94
COL2A1P02458 RPS15AP9-201ENST00000439856 381 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.91□□□□□ -1.94
COL2A1P02458 AC233279.1-201ENST00000455300 423 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 HMGB1P25-201ENST00000468402 607 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 RPL23AP45-201ENST00000476406 468 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 RN7SL636P-201ENST00000497504 294 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.91□□□□□ -1.94
COL2A1P02458 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.91□□□□□ -1.94
COL2A1P02458 AC093331.1-201ENST00000521474 169 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AF279873.1-201ENST00000523393 313 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 RPL23AP84-201ENST00000571193 464 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.91□□□□□ -1.94
COL2A1P02458 AC008687.2-201ENST00000597865 520 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 MIR1302-2-201ENST00000607096 138 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AL391813.2-201ENST00000609113 322 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AC026634.1-201ENST00000634369 198 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 AL512643.1-201ENST00000635735 524 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 OR4G2P-202ENST00000641004 1759 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL2A1P02458 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL2A1P02458 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.91□□□□□ -1.94
COL2A1P02458 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL2A1P02458 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
COL2A1P02458 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.91□□□□□ -1.94
COL2A1P02458 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL2A1P02458 RNU6-223P-201ENST00000362830 107 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 RN7SKP44-201ENST00000363602 316 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 Y_RNA.216-201ENST00000364205 93 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 RNU6-769P-201ENST00000384407 104 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
COL2A1P02458 DHFRP6-201ENST00000401776 268 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AL353729.1-201ENST00000425044 720 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 RPL23AP74-201ENST00000437246 471 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 RPL23AP20-201ENST00000447965 421 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AC243772.1-201ENST00000451620 410 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AC112204.1-201ENST00000502591 103 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.9□□□□□ -1.94
COL2A1P02458 AC103851.1-201ENST00000506833 274 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AC112206.3-201ENST00000514578 389 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.9□□□□□ -1.94
COL2A1P02458 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.9□□□□□ -1.94
COL2A1P02458 RNA5SP76-201ENST00000516277 87 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 RNU7-30P-201ENST00000516835 62 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.9□□□□□ -1.94
COL2A1P02458 AP005597.4-201ENST00000526762 229 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.9□□□□□ -1.94
COL2A1P02458 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.9□□□□□ -1.94
COL2A1P02458 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.9□□□□□ -1.94
COL2A1P02458 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.9□□□□□ -1.94
COL2A1P02458 LARP7P2-201ENST00000575306 125 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 MIR1273D-201ENST00000577266 86 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AL162413.1-201ENST00000603198 110 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AP000942.4-201ENST00000604811 241 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AC007938.3-201ENST00000604965 623 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 AC123768.4-201ENST00000616244 701 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 uc_338.9-201ENST00000617424 182 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.9□□□□□ -1.94
COL2A1P02458 AL158801.5-201ENST00000623123 465 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.9□□□□□ -1.94
COL2A1P02458 MIR1291-201ENST00000627649 87 ntBASIC2.9□□□□□ -1.94
COL2A1P02458 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL2A1P02458 NUP58P1-201ENST00000502546 1738 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL2A1P02458 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.9□□□□□ -1.95
COL2A1P02458 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL2A1P02458 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
COL2A1P02458 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.9□□□□□ -1.95
COL2A1P02458 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.9□□□□□ -1.95
COL2A1P02458 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL2A1P02458 RNU6-254P-201ENST00000363377 107 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.9□□□□□ -1.95
COL2A1P02458 RNU6-1103P-201ENST00000384150 107 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC010881.1-201ENST00000433830 235 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.9□□□□□ -1.95
COL2A1P02458 AC009969.1-201ENST00000438726 172 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 USP9YP15-201ENST00000442391 422 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.9□□□□□ -1.95
COL2A1P02458 RNU7-136P-201ENST00000458819 69 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC023194.1-201ENST00000493084 308 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 TMEM251P1-201ENST00000503717 318 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL2A1P02458 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.9□□□□□ -1.95
COL2A1P02458 AC006499.2-201ENST00000513470 337 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.9□□□□□ -1.95
COL2A1P02458 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.9□□□□□ -1.95
COL2A1P02458 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.9□□□□□ -1.95
COL2A1P02458 AC023050.3-201ENST00000541142 333 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC123904.2-201ENST00000548059 300 ntBASIC2.9□□□□□ -1.95
COL2A1P02458 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.9□□□□□ -1.95
COL2A1P02458 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.9□□□□□ -1.95
COL2A1P02458 MIR3682-201ENST00000581338 84 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms