Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-960P-201ENST00000364056 120 ntBASIC3.33□□□□□ -1.88
DDX58O95786 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX58O95786 AL139397.2-201ENST00000404529 772 ntBASIC3.33□□□□□ -1.88
DDX58O95786 RPS12P24-201ENST00000412619 387 ntBASIC3.33□□□□□ -1.88
DDX58O95786 NDUFS5P4-201ENST00000412983 318 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.33□□□□□ -1.88
DDX58O95786 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX58O95786 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX58O95786 AL365496.1-201ENST00000426885 215 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AL591212.2-201ENST00000433923 257 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX58O95786 HMGB3P12-201ENST00000438745 556 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AL136380.1-201ENST00000447970 162 ntBASIC3.33□□□□□ -1.88
DDX58O95786 RPS15AP27-201ENST00000449183 343 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX58O95786 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX58O95786 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX58O95786 AC087883.1-201ENST00000551882 391 ntBASIC3.33□□□□□ -1.88
DDX58O95786 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX58O95786 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX58O95786 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX58O95786 NRBF2P1-201ENST00000587407 859 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.33□□□□□ -1.88
DDX58O95786 AC064872.1-201ENST00000604823 1072 ntBASIC3.33□□□□□ -1.88
DDX58O95786 MIR98-201ENST00000606724 119 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AC004832.5-201ENST00000608677 401 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AL365204.3-201ENST00000612448 685 ntBASIC3.33□□□□□ -1.88
DDX58O95786 AC011939.3-201ENST00000613686 466 ntBASIC3.33□□□□□ -1.88
DDX58O95786 MIR6817-201ENST00000615588 66 ntBASIC3.33□□□□□ -1.88
DDX58O95786 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
DDX58O95786 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
DDX58O95786 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.33□□□□□ -1.88
DDX58O95786 Y_RNA.51-201ENST00000362725 102 ntBASIC3.32□□□□□ -1.88
DDX58O95786 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DDX58O95786 DYNLT3P1-201ENST00000378574 347 ntBASIC3.32□□□□□ -1.88
DDX58O95786 RNU6-946P-201ENST00000383878 107 ntBASIC3.32□□□□□ -1.88
DDX58O95786 RNU6-190P-201ENST00000384154 102 ntBASIC3.32□□□□□ -1.88
DDX58O95786 RNU6-39P-201ENST00000384344 107 ntBASIC3.32□□□□□ -1.88
DDX58O95786 RNU6-14P-201ENST00000384630 106 ntBASIC3.32□□□□□ -1.88
DDX58O95786 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
DDX58O95786 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX58O95786 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX58O95786 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX58O95786 AC009414.1-201ENST00000427200 443 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AL592045.1-201ENST00000429867 352 ntBASIC3.32□□□□□ -1.88
DDX58O95786 RPL31P35-201ENST00000431058 377 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AC009961.2-201ENST00000435771 251 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AC009296.1-201ENST00000443146 155 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.32□□□□□ -1.88
DDX58O95786 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX58O95786 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX58O95786 AL122001.1-201ENST00000457027 370 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.32□□□□□ -1.88
DDX58O95786 AC128713.1-201ENST00000471495 306 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AC105313.1-201ENST00000509121 353 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AC022616.3-201ENST00000523940 148 ntBASIC3.32□□□□□ -1.88
DDX58O95786 SUB1P1-201ENST00000524415 382 ntBASIC3.32□□□□□ -1.88
DDX58O95786 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX58O95786 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX58O95786 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.32□□□□□ -1.88
DDX58O95786 AL355598.1-201ENST00000604169 202 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AL451064.1-201ENST00000607718 471 ntBASIC3.32□□□□□ -1.88
DDX58O95786 DUSP12P1-201ENST00000612874 516 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AC009090.3-201ENST00000616553 565 ntBASIC3.32□□□□□ -1.88
DDX58O95786 AL512643.1-201ENST00000635735 524 ntBASIC3.32□□□□□ -1.88
DDX58O95786 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DDX58O95786 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
DDX58O95786 AC008264.2-201ENST00000610193 3731 ntBASIC3.31□□□□□ -1.88
DDX58O95786 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.31□□□□□ -1.88
DDX58O95786 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDX58O95786 RNU6-641P-201ENST00000384006 107 ntBASIC3.31□□□□□ -1.88
DDX58O95786 MIR301A-201ENST00000385261 86 ntBASIC3.31□□□□□ -1.88
DDX58O95786 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DDX58O95786 RNU6-248P-201ENST00000410720 107 ntBASIC3.31□□□□□ -1.88
DDX58O95786 ISCA1P1-201ENST00000426679 387 ntBASIC3.31□□□□□ -1.88
DDX58O95786 OR2B8P-201ENST00000432841 938 ntBASIC3.31□□□□□ -1.88
DDX58O95786 RPS15AP5-201ENST00000436276 388 ntBASIC3.31□□□□□ -1.88
DDX58O95786 RPS24P1-201ENST00000438550 371 ntBASIC3.31□□□□□ -1.88
DDX58O95786 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX58O95786 FABP5P15-201ENST00000453566 214 ntBASIC3.31□□□□□ -1.88
DDX58O95786 RPS3P1-201ENST00000456781 192 ntBASIC3.31□□□□□ -1.88
DDX58O95786 RN7SL283P-201ENST00000489055 303 ntBASIC3.31□□□□□ -1.88
DDX58O95786 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX58O95786 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.31□□□□□ -1.88
DDX58O95786 AC022634.1-201ENST00000520765 532 ntBASIC3.31□□□□□ -1.88
DDX58O95786 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.31□□□□□ -1.88
DDX58O95786 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.31□□□□□ -1.88
DDX58O95786 AC012213.3-201ENST00000577199 777 ntBASIC3.31□□□□□ -1.88
DDX58O95786 MIR3913-1-201ENST00000577744 102 ntBASIC3.31□□□□□ -1.88
DDX58O95786 MIR3167-201ENST00000579623 85 ntBASIC3.31□□□□□ -1.88
DDX58O95786 MIR3611-201ENST00000584484 83 ntBASIC3.31□□□□□ -1.88
DDX58O95786 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.31□□□□□ -1.88
DDX58O95786 AC174048.1-201ENST00000603389 144 ntBASIC3.31□□□□□ -1.88
DDX58O95786 AP002360.4-201ENST00000606980 481 ntBASIC3.31□□□□□ -1.88
DDX58O95786 AC098614.4-201ENST00000607601 462 ntBASIC3.31□□□□□ -1.88
DDX58O95786 AC048344.4-201ENST00000619744 527 ntBASIC3.31□□□□□ -1.88
DDX58O95786 MIR3199-2-201ENST00000636243 86 ntBASIC3.31□□□□□ -1.88
DDX58O95786 MTND5P42-201ENST00000637720 498 ntBASIC3.31□□□□□ -1.88
DDX58O95786 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.31□□□□□ -1.88
DDX58O95786 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms