Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SNRPEP7-201ENST00000438350 220 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 AC010099.1-201ENST00000455434 375 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 RNU1-98P-201ENST00000458992 160 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CACNA1AO00555 AC104997.1-201ENST00000519761 717 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 AL391834.1-201ENST00000609609 560 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 MIR6076-201ENST00000617521 113 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 AC109809.1-201ENST00000619665 545 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 AC010809.3-201ENST00000621310 641 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 MIR4320-201ENST00000636981 65 ntBASIC0.59□□□□□ -2.32
CACNA1AO00555 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.59□□□□□ -2.32
CACNA1AO00555 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CACNA1AO00555 RNU6-335P-201ENST00000364563 113 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.58□□□□□ -2.32
CACNA1AO00555 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.58□□□□□ -2.32
CACNA1AO00555 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CACNA1AO00555 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.58□□□□□ -2.32
CACNA1AO00555 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CACNA1AO00555 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.58□□□□□ -2.32
CACNA1AO00555 OR5BM1P-201ENST00000512021 366 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 AC087045.1-201ENST00000605856 382 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
CACNA1AO00555 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CACNA1AO00555 SNORA51.2-201ENST00000364595 132 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 RNU6-339P-201ENST00000384310 107 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 HNRNPDP2-201ENST00000406475 478 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 RPS15AP5-201ENST00000436276 388 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.58□□□□□ -2.32
CACNA1AO00555 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.58□□□□□ -2.32
CACNA1AO00555 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.58□□□□□ -2.32
CACNA1AO00555 AC010285.1-201ENST00000470580 392 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.58□□□□□ -2.32
CACNA1AO00555 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.58□□□□□ -2.32
CACNA1AO00555 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.58□□□□□ -2.32
CACNA1AO00555 NDUFS5P6-201ENST00000529136 295 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 AP003717.3-201ENST00000544832 1180 ntBASIC0.58□□□□□ -2.32
CACNA1AO00555 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.58□□□□□ -2.32
CACNA1AO00555 RNY4P28-201ENST00000365281 93 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CACNA1AO00555 SFR1P1-201ENST00000403720 688 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 AC096533.1-201ENST00000411645 353 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 AC006461.1-201ENST00000412637 326 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 RSU1P2-202ENST00000437884 485 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.57□□□□□ -2.32
CACNA1AO00555 HMGN2P21-201ENST00000447764 270 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 RPL22P13-201ENST00000493291 347 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CACNA1AO00555 PCNAP1-201ENST00000505363 709 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 AC011406.1-201ENST00000512440 370 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 AC141557.1-201ENST00000540982 400 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 OR6C73P-201ENST00000546432 358 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 HMGB1P24-202ENST00000615653 685 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CACNA1AO00555 MTND5P17-201ENST00000418405 1603 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 CCNG1P1-201ENST00000406783 885 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 RNU2-41P-201ENST00000410991 178 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.57□□□□□ -2.32
CACNA1AO00555 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.57□□□□□ -2.32
CACNA1AO00555 AC092001.1-201ENST00000453012 261 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 CBX3P3-201ENST00000508108 532 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 RNU1-61P-201ENST00000516107 151 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 AC022880.1-201ENST00000534017 973 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 MIR4658-201ENST00000584344 65 ntBASIC0.57□□□□□ -2.32
CACNA1AO00555 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CACNA1AO00555 Y_RNA.86-201ENST00000363020 111 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.56□□□□□ -2.32
CACNA1AO00555 AL034374.1-201ENST00000406329 351 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 SNORA81-201ENST00000408493 178 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.56□□□□□ -2.32
CACNA1AO00555 RPS26P56-201ENST00000444468 240 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AC117503.1-201ENST00000472241 394 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AC020699.1-201ENST00000505161 445 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AC118282.2-201ENST00000508739 374 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.56□□□□□ -2.32
CACNA1AO00555 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.56□□□□□ -2.32
CACNA1AO00555 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.56□□□□□ -2.32
CACNA1AO00555 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.56□□□□□ -2.32
CACNA1AO00555 COX6CP3-201ENST00000580869 223 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AP001486.3-201ENST00000615334 372 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CACNA1AO00555 CISD1P1-201ENST00000393907 327 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 RNU2-71P-201ENST00000411395 189 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 HMGN2P30-201ENST00000423237 256 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 SUMO2P2-201ENST00000456482 255 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.56□□□□□ -2.32
CACNA1AO00555 MTCO3P35-201ENST00000485582 781 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CACNA1AO00555 AL160236.1-201ENST00000556317 195 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AC025449.1-201ENST00000603896 529 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AL355297.2-201ENST00000604792 129 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 AC096586.2-201ENST00000610260 441 ntBASIC0.56□□□□□ -2.32
CACNA1AO00555 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CACNA1AO00555 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.55□□□□□ -2.32
CACNA1AO00555 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.55□□□□□ -2.32
CACNA1AO00555 AC083875.1-201ENST00000419509 405 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AC079780.1-201ENST00000428259 207 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 AL645638.1-201ENST00000440519 361 ntBASIC0.55□□□□□ -2.32
CACNA1AO00555 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms