Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PIGFP3-201ENST00000441918 722 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AL078601.1-201ENST00000444542 271 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AL162151.2-201ENST00000448875 158 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 MTND4LP30-201ENST00000454092 297 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 ANP32BP2-201ENST00000454525 545 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 RN7SL542P-201ENST00000467147 294 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 RN7SL604P-201ENST00000492589 296 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AC025465.3-201ENST00000510570 311 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 MTND1P19-201ENST00000511780 315 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AC099522.1-202ENST00000514718 367 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AL355877.2-201ENST00000603670 358 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AC006077.1-201ENST00000604746 343 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AC090132.2-201ENST00000615881 347 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 Z75746.1-201ENST00000440243 2080 ntBASIC5.25□□□□□ -1.57
USP17L3A6NCW0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP17L3A6NCW0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 Y_RNA.27-201ENST00000362540 103 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 RNA5SP130-201ENST00000364431 114 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 U3.13-201ENST00000364804 214 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 TOMM22P1-201ENST00000418578 312 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 KC877373.1-201ENST00000479066 408 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 AL592156.1-201ENST00000508758 304 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 RNA5SP446-201ENST00000515955 82 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 RNU6-377P-201ENST00000515965 102 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 AC005476.1-201ENST00000554427 397 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 MIR6875-201ENST00000617506 72 ntBASIC5.24□□□□□ -1.57
USP17L3A6NCW0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.24□□□□□ -1.57
USP17L3A6NCW0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 U3.6-201ENST00000363622 211 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RNU5E-7P-201ENST00000365290 117 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RNU6-166P-201ENST00000384371 107 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RNA5SP171-201ENST00000391071 115 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RNU2-68P-201ENST00000410878 191 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RPL21P91-201ENST00000429231 479 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 SUMO1P3-201ENST00000439961 304 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC079354.2-201ENST00000453523 154 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RPL35AP15-201ENST00000468042 339 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 HMGB1P35-201ENST00000503360 598 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC074250.1-201ENST00000511117 192 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RNU6-572P-201ENST00000516724 80 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 RNA5SP165-201ENST00000517142 115 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC005046.1-201ENST00000608515 625 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC027309.3-201ENST00000623419 351 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AP000560.1-201ENST00000624150 1937 ntBASIC5.23□□□□□ -1.57
USP17L3A6NCW0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 RNU6-227P-201ENST00000362865 103 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 RNU1-63P-201ENST00000383902 164 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 MIR554-201ENST00000384874 96 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 MIR548H3-201ENST00000408771 118 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 HIGD1AP2-201ENST00000446367 280 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 AC092798.1-201ENST00000458542 409 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 RNA5SP73-201ENST00000516744 108 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 AC053481.4-201ENST00000583164 216 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 AC006557.5-201ENST00000603126 811 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.22□□□□□ -1.57
USP17L3A6NCW0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.22□□□□□ -1.57
USP17L3A6NCW0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms