Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC098591.2-201ENST00000510152 315 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AC090666.1-201ENST00000578241 445 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AC010620.1-201ENST00000601088 1102 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AC006213.5-201ENST00000619673 288 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AC243829.3-201ENST00000622177 108 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.71□□□□□ -2.3
CNOT1A5YKK6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CNOT1A5YKK6 SNORA9.1-201ENST00000362412 131 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 RNU6-220P-201ENST00000390919 107 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC008834.1-201ENST00000511612 175 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 RNU7-193P-201ENST00000516723 65 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 EIF4A1P12-201ENST00000551910 141 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC115085.1-201ENST00000588924 229 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AL009028.1-201ENST00000604895 802 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AP000776.1-201ENST00000530032 1663 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 U8.14-201ENST00000390843 143 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC079448.1-201ENST00000449377 373 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 RPL23AP3-201ENST00000453844 468 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 SNORA48.10-201ENST00000516965 160 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.7□□□□□ -2.3
CNOT1A5YKK6 MIR4802-201ENST00000581881 80 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AC003001.2-201ENST00000616294 831 ntBASIC0.7□□□□□ -2.3
CNOT1A5YKK6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 RNU6-48P-201ENST00000384161 107 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 snoU109.1-201ENST00000459339 135 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AC087884.1-201ENST00000469738 328 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AC107626.1-201ENST00000471084 183 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AP001960.1-201ENST00000506494 658 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 RNU6-362P-201ENST00000516736 90 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AC008676.3-201ENST00000521237 435 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 MIR3609-201ENST00000582661 80 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 SNORA81-201ENST00000408493 178 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 RPL21P24-201ENST00000413752 448 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.69□□□□□ -2.3
CNOT1A5YKK6 UBE2L4-201ENST00000587688 464 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AL078605.1-201ENST00000603529 500 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 AL356585.4-201ENST00000623078 1229 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 MIR5087-201ENST00000635826 76 ntBASIC0.69□□□□□ -2.3
CNOT1A5YKK6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 MTCO1P3-201ENST00000429327 192 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 MICF-203ENST00000432679 129 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 AC073614.1-201ENST00000438690 650 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 OR6C72P-201ENST00000451403 892 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.68□□□□□ -2.3
CNOT1A5YKK6 CYCSP2-201ENST00000558168 301 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CNOT1A5YKK6 SNORA63.3-201ENST00000362682 132 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 U3.13-201ENST00000364804 214 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.68□□□□□ -2.3
CNOT1A5YKK6 RNU6-39P-201ENST00000384344 107 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 RNA5SP450-201ENST00000411206 102 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 TOMM22P2-201ENST00000430735 237 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.68□□□□□ -2.3
CNOT1A5YKK6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.68□□□□□ -2.3
CNOT1A5YKK6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.68□□□□□ -2.3
CNOT1A5YKK6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.68□□□□□ -2.3
CNOT1A5YKK6 AC016925.2-201ENST00000605108 242 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 AL050343.2-201ENST00000607338 280 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.68□□□□□ -2.3
CNOT1A5YKK6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AL160236.1-201ENST00000556317 195 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 MIR7157-201ENST00000635801 60 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 Y_RNA.132-201ENST00000363421 102 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 RNY3-201ENST00000365484 102 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 Y_RNA.457-201ENST00000384237 111 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 RNA5SP266-201ENST00000410273 108 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC117503.1-201ENST00000472241 394 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC098862.1-201ENST00000504991 413 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC093770.1-201ENST00000511559 571 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC073111.2-201ENST00000605657 1075 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC004852.3-201ENST00000614131 326 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 AC090132.2-201ENST00000615881 347 ntBASIC0.67□□□□□ -2.3
CNOT1A5YKK6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AL390862.1-201ENST00000635467 1469 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CNOT1A5YKK6 U3.20-201ENST00000390909 217 ntBASIC0.66□□□□□ -2.3
CNOT1A5YKK6 AC068050.1-201ENST00000394891 380 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms