Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AL139421.1-201ENST00000423010 169 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 RPL7P34-201ENST00000433316 712 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 PTGES3P1-201ENST00000439531 483 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 MTCO3P43-201ENST00000440974 771 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 ARPC3P5-201ENST00000448802 534 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 MTND2P30-201ENST00000456663 382 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 RNU1-98P-201ENST00000458992 160 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 SNORA48.9-201ENST00000516419 162 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 RN7SKP219-201ENST00000516825 296 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-714P-201ENST00000516963 103 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AL353997.4-201ENST00000586196 166 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 UBE2L4-201ENST00000587688 464 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC090330.1-201ENST00000588646 764 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC025811.1-201ENST00000604312 472 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC126118.1-201ENST00000607744 628 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AF129408.1-201ENST00000608767 431 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 AC011939.3-201ENST00000613686 466 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 LINC02211-204ENST00000642024 1070 ntBASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV3A0A0B4J244 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 U8.3-201ENST00000363321 132 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-1078P-201ENST00000364522 103 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-707P-201ENST00000364647 95 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 RNA5SP240-201ENST00000365355 128 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 SNORA8-201ENST00000384574 139 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 SNORA40.19-201ENST00000390846 128 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 SNORD65.1-201ENST00000390889 71 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AL356432.1-201ENST00000405809 419 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 PTGES3P2-201ENST00000407942 482 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 RNU2-63P-201ENST00000410792 194 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-516P-201ENST00000411381 104 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 MTCYBP38-201ENST00000417160 1123 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC244636.1-201ENST00000421152 228 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 MTND2P29-201ENST00000438595 412 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 USP9YP22-201ENST00000438971 294 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 DNAJC19P4-201ENST00000440115 345 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC244505.3-201ENST00000454598 187 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 HMGN2P23-201ENST00000456759 269 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 snoU13.8-201ENST00000458890 104 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 Y_RNA.675-201ENST00000516389 149 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 RNA5SP61-201ENST00000516453 100 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 RNU6-840P-201ENST00000517275 65 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC107953.1-201ENST00000522216 297 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 MRPS36P5-201ENST00000551909 298 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 HIGD1AP17-201ENST00000554576 276 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AL731537.2-201ENST00000561565 951 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 DUSP12P1-201ENST00000612874 516 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC005332.6-201ENST00000613178 446 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC009268.2-201ENST00000621925 457 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 AC091953.2-201ENST00000623979 160 ntBASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
TRAV3A0A0B4J244 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 SNORA67.5-201ENST00000391036 107 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AL161449.1-201ENST00000414531 1199 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AL354695.1-201ENST00000427935 228 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AL161651.1-201ENST00000440882 223 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC009238.1-201ENST00000442165 424 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC009237.6-201ENST00000446969 424 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC002381.1-201ENST00000447049 280 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 SNORA48.11-201ENST00000517015 89 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 RNA5SP290-201ENST00000517133 127 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 OR5AL2P-201ENST00000532185 920 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC022880.1-201ENST00000534017 973 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 HSBP1P1-201ENST00000555205 166 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC009977.1-201ENST00000586015 570 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 BNIP3P23-201ENST00000599655 511 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AL139344.1-201ENST00000605228 195 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC008759.3-201ENST00000613300 508 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 MIR5739-201ENST00000619803 80 ntBASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV3A0A0B4J244 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms