Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 MIR3921-201ENST00000577308 85 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 AC091178.1-203ENST00000584586 279 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 AC005255.1-201ENST00000593748 216 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 AL645944.1-201ENST00000603857 493 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 AC140113.4-201ENST00000622087 222 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.84□□□□□ -1.64
CNTN3Q9P232 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CNTN3Q9P232 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.84□□□□□ -1.64
CNTN3Q9P232 AP000560.1-201ENST00000624150 1937 ntBASIC4.84□□□□□ -1.64
CNTN3Q9P232 NCAPGP1-201ENST00000505112 1814 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 AC068538.1-201ENST00000376856 336 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 RNU2-25P-201ENST00000411041 191 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 RNU2-71P-201ENST00000411395 189 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 TPT1P12-201ENST00000448968 492 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 FABP5P15-201ENST00000453566 214 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 RN7SL98P-201ENST00000462271 300 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 RPL23AP45-201ENST00000476406 468 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AL160314.1-201ENST00000490836 438 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AC078817.1-201ENST00000492623 435 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AC074250.1-201ENST00000511117 192 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AC093840.1-201ENST00000511599 336 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AL590705.4-201ENST00000532209 134 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 AC009318.2-201ENST00000610917 651 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 AL023881.1-201ENST00000621088 301 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.83□□□□□ -1.64
CNTN3Q9P232 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 A2MP1-204ENST00000566278 4130 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 MAPK10-286ENST00000641208 8747 ntBASIC4.83□□□□□ -1.64
CNTN3Q9P232 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTN3Q9P232 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTN3Q9P232 MFSD8-242ENST00000641690 4199 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTN3Q9P232 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNTN3Q9P232 SNORD14B-201ENST00000364533 90 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 MIR548M-201ENST00000408260 86 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 RNA5SP494-201ENST00000410653 129 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 RNU6-1203P-201ENST00000410703 110 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 Y_RNA.623-201ENST00000411128 95 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 AL117339.3-201ENST00000418733 162 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 AL356867.1-201ENST00000429623 299 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 RPS29P17-201ENST00000430795 166 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 AC011998.1-201ENST00000433403 117 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNTN3Q9P232 NDUFS5P3-201ENST00000450668 321 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 snoU13.24-201ENST00000458998 104 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 AC010285.1-201ENST00000470580 392 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 RPL7P5-201ENST00000471472 736 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 AC104164.2-201ENST00000496953 495 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 AC078918.1-201ENST00000498515 228 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 RNA5SP446-201ENST00000515955 82 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTN3Q9P232 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTN3Q9P232 AP000542.2-201ENST00000623199 6179 ntBASIC4.82□□□□□ -1.64
CNTN3Q9P232 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CNTN3Q9P232 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTN3Q9P232 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTN3Q9P232 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 RNA5SP189-201ENST00000364920 115 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 RNA5SP151-201ENST00000365632 117 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 Y_RNA.555-201ENST00000384673 110 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 AL137100.2-201ENST00000555786 315 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 RPL21P7-201ENST00000557463 483 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTN3Q9P232 MIR4697-201ENST00000582977 78 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 AC008121.1-201ENST00000603244 268 ntBASIC4.81□□□□□ -1.64
CNTN3Q9P232 AC009779.6-201ENST00000603972 165 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms