Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 CACYBPP2-201ENST00000453625 678 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 TRBV1-201ENST00000476502 284 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AL163973.1-201ENST00000484753 577 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC026403.1-201ENST00000518938 295 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 PSMA2P1-201ENST00000526365 646 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 OR5AQ1P-201ENST00000527596 927 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC015917.1-201ENST00000579654 510 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 BNIP3P30-201ENST00000601184 574 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC025165.5-201ENST00000602802 578 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AL355598.1-201ENST00000604169 202 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 MIR7851-201ENST00000610611 160 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AL356321.1-201ENST00000621360 228 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC024940.5-201ENST00000622889 474 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC6A13Q9NSD5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 CKAP2P1-201ENST00000555477 2049 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.33-201ENST00000362591 102 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-884P-201ENST00000363889 107 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 SNORA69-201ENST00000383895 132 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-903P-201ENST00000391270 109 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 MIR548F1-201ENST00000408667 84 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-648P-201ENST00000410190 107 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 MTCYBP8-201ENST00000422855 651 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 USP9YP18-201ENST00000425912 695 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 UBE2V1P8-201ENST00000437166 265 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AL714022.1-201ENST00000439897 151 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 RPL21P23-201ENST00000446654 460 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AL031183.1-201ENST00000457667 207 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 RPL21P13-201ENST00000488305 481 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC037471.2-201ENST00000564941 598 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 MIR548AC-201ENST00000585049 88 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC090517.2-201ENST00000614966 680 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 AC012314.7-201ENST00000619693 93 ntBASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC6A13Q9NSD5 MTND4P35-201ENST00000604257 1375 ntBASIC3.09□□□□□ -1.92
SLC6A13Q9NSD5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
SLC6A13Q9NSD5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.09□□□□□ -1.92
SLC6A13Q9NSD5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SLC6A13Q9NSD5 ELF2P3-201ENST00000445099 1506 ntBASIC3.09□□□□□ -1.92
SLC6A13Q9NSD5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 MTND5P7-201ENST00000413558 1798 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-778P-201ENST00000363269 103 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-483P-201ENST00000384088 108 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-1025P-201ENST00000410629 104 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 BX323014.1-201ENST00000412876 237 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 EIF1P1-201ENST00000421436 341 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RPL21P40-201ENST00000428586 483 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RPL37P4-201ENST00000448908 268 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC003071.1-201ENST00000451219 789 ntBASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.08□□□□□ -1.92
SLC6A13Q9NSD5 RPL26P9-201ENST00000457466 433 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms