Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 MTND4LP21-201ENST00000415303 295 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 VN1R42P-201ENST00000424651 344 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 EIF4EP3-201ENST00000498782 656 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 COL6A4P2-205ENST00000509855 506 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AC004062.1-201ENST00000509926 645 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 RNU6-496P-201ENST00000516145 99 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 MIR4493-201ENST00000584016 73 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AL391834.1-201ENST00000609609 560 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AC006963.1-201ENST00000624003 1052 ntBASIC0.63□□□□□ -2.31
CHD8Q9HCK8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
CHD8Q9HCK8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AL591043.1-201ENST00000432461 424 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AC078857.1-201ENST00000469870 667 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AC005741.1-201ENST00000511094 432 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 RNA5SP471-201ENST00000516971 106 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 LSM6P2-201ENST00000552208 177 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AC106052.1-201ENST00000608029 497 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 MT-TP-201ENST00000387461 68 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 UBE2D3P2-201ENST00000424409 445 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 SSXP4-201ENST00000451349 245 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 RPS27P21-201ENST00000486977 252 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 MIR4305-201ENST00000583252 102 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 AL355297.2-201ENST00000604792 129 ntBASIC0.62□□□□□ -2.31
CHD8Q9HCK8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CHD8Q9HCK8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
CHD8Q9HCK8 Y_RNA.65-201ENST00000362846 100 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 RPL23AP32-201ENST00000395315 459 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.61□□□□□ -2.31
CHD8Q9HCK8 SDAD1P3-201ENST00000427380 333 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 snoU13.7-201ENST00000459220 104 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AP002371.1-201ENST00000463604 433 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AC091435.1-201ENST00000505442 584 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 CIR1P1-201ENST00000524055 1133 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 NDUFS5P6-201ENST00000529136 295 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 RNY1P9-201ENST00000532431 109 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AL109918.3-201ENST00000603072 338 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 HMGB1P24-202ENST00000615653 685 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 MIR6864-201ENST00000617935 70 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 MIR7515-201ENST00000637837 67 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 RNU6-1072P-201ENST00000384703 107 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 RNU6-443P-201ENST00000384780 107 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AL138880.1-201ENST00000405824 642 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 RNU4-65P-201ENST00000410473 140 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AC117503.1-201ENST00000472241 394 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.61□□□□□ -2.31
CHD8Q9HCK8 NDUFB4P2-201ENST00000509515 391 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AC108157.1-201ENST00000510511 539 ntBASIC0.61□□□□□ -2.31
CHD8Q9HCK8 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CHD8Q9HCK8 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.61□□□□□ -2.31
CHD8Q9HCK8 U8.3-201ENST00000363321 132 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 SNORA67.1-201ENST00000364749 141 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC010099.1-201ENST00000455434 375 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 SYPL1P1-201ENST00000473622 768 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC118282.2-201ENST00000508739 374 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 Y_RNA.659-201ENST00000515994 113 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 SNORA62.5-201ENST00000516634 120 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 ERHP1-201ENST00000523006 310 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC087272.1-201ENST00000523624 533 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AP005639.2-201ENST00000527592 928 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 MIR378F-201ENST00000578143 78 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AL139344.1-201ENST00000605228 195 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC087359.1-201ENST00000508335 1740 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AL022578.1-201ENST00000439330 1433 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC096656.1-201ENST00000623826 1364 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 SNORA16B-201ENST00000364674 135 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 RNA5SP125-201ENST00000364843 120 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 Y_RNA.468-201ENST00000384298 102 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 MTND4P11-201ENST00000417020 1058 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AL356320.2-201ENST00000417263 507 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 RNU1-98P-201ENST00000458992 160 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 CYCSP26-201ENST00000534107 320 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AC090616.3-201ENST00000582184 217 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.6□□□□□ -2.31
CHD8Q9HCK8 MIR203B-201ENST00000636080 86 ntBASIC0.6□□□□□ -2.31
CHD8Q9HCK8 AL356379.1-201ENST00000414105 126 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms