Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PPP1R11P2-201ENST00000423543 382 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC108022.1-201ENST00000493466 478 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 SUMO2P6-201ENST00000505273 288 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 RNU1-6P-201ENST00000516290 144 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 MIR2355-201ENST00000517199 87 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC093249.4-201ENST00000564755 259 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 MIR3934-201ENST00000579806 107 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 MIR4659A-201ENST00000580269 81 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AL355812.1-201ENST00000603215 216 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 BRDTP1-201ENST00000605735 677 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 FAM25E-202ENST00000608562 189 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 AC011476.5-201ENST00000615594 130 ntBASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NUCKS1Q9H1E3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AC010329.2-201ENST00000595195 2737 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 RN7SKP227-201ENST00000364445 330 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-326P-201ENST00000365480 107 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 MT-TC-201ENST00000387405 66 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 SNORD78.2-201ENST00000391076 69 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AL590762.2-201ENST00000395798 571 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 MIR937-201ENST00000401271 86 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 RPL23AP36-201ENST00000413895 458 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 USP9YP7-201ENST00000436723 430 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 USP9YP32-201ENST00000452432 430 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AP001324.2-201ENST00000461163 319 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AC010326.1-201ENST00000462726 602 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AC022493.1-201ENST00000492984 337 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 MIR892C-201ENST00000516410 77 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AC104581.2-201ENST00000572227 430 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 MIR5699-201ENST00000578903 90 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 MIR4282-201ENST00000583613 67 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AL049539.1-201ENST00000611964 459 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 AL136164.3-201ENST00000624429 3978 ntBASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUCKS1Q9H1E3 PRO1804-201ENST00000623780 2050 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 U3.6-201ENST00000363622 211 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.418-201ENST00000384029 102 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 MIR195-201ENST00000385194 87 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 GLULP6-201ENST00000399502 913 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 Y_RNA.590-201ENST00000410140 107 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AL160275.2-201ENST00000412010 394 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 TMSB10P2-201ENST00000416049 131 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 HIGD1AP2-201ENST00000446367 280 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 BX276092.4-201ENST00000452056 248 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 RNU6-1219P-201ENST00000516143 112 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 RNU2-31P-201ENST00000516954 155 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AC015912.2-201ENST00000571053 181 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AC022726.1-201ENST00000587475 207 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AC123786.2-201ENST00000603459 275 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AL365222.1-201ENST00000614661 98 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AC005086.4-201ENST00000623065 213 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AC091953.3-201ENST00000623220 236 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 MIR6715B-201ENST00000637172 77 ntBASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.12□□□□□ -1.59
NUCKS1Q9H1E3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms