Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 USP8P1-201ENST00000494673 3183 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.39-201ENST00000362620 98 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 RNU6-288P-201ENST00000363690 104 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.314-201ENST00000365114 102 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 RNU6-842P-201ENST00000384269 107 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 MIR1179-201ENST00000408703 91 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 RNA5SP39-201ENST00000411245 120 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 RNU6-293P-201ENST00000411259 106 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 DYNLT3P2-201ENST00000442517 295 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AL451050.1-201ENST00000450126 415 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 CEACAMP4-201ENST00000457676 421 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 RNU7-187P-201ENST00000458985 68 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC008571.1-201ENST00000467232 300 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC068781.1-201ENST00000488231 618 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 RNU6-307P-201ENST00000516743 106 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 SNORA31.22-201ENST00000517204 135 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 CYCSP27-201ENST00000527643 293 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC012119.1-201ENST00000603184 222 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AL355810.1-201ENST00000614629 552 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AL133412.1-201ENST00000380194 2992 ntBASIC4.3□□□□□ -1.72
RNF38Q9H0F5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF38Q9H0F5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 ZNF72P-201ENST00000425869 1908 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.106-201ENST00000363189 100 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.151-201ENST00000363566 112 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 RNU6-266P-201ENST00000364225 107 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 Y_RNA.447-201ENST00000384184 113 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 RPL26P6-201ENST00000440913 438 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 NOTCH2P1-201ENST00000443481 624 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC025445.1-201ENST00000502728 300 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 RNY3P15-201ENST00000516297 97 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 ERHP1-201ENST00000523006 310 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC104576.1-201ENST00000524225 88 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC109446.1-201ENST00000566172 220 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC034105.4-201ENST00000568304 277 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AC067852.3-201ENST00000589177 561 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 AL355297.3-201ENST00000604082 446 ntBASIC4.29□□□□□ -1.72
RNF38Q9H0F5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF38Q9H0F5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AL137003.2-201ENST00000606924 2538 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RNU1-15P-201ENST00000353977 144 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RNU6-874P-201ENST00000362390 105 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RNU6-713P-201ENST00000384761 107 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 MIR517A-201ENST00000385001 87 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC110754.1-201ENST00000399740 601 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RN7SKP27-201ENST00000410684 333 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 HSPE1P12-201ENST00000412576 301 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AL356968.1-201ENST00000416622 474 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AL158071.1-201ENST00000430315 461 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 ARL5AP4-201ENST00000430731 512 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RPS15AP10-201ENST00000432472 382 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 VDAC1P3-201ENST00000434069 851 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 FTH1P25-201ENST00000447665 469 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RPS26P28-201ENST00000470806 348 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF38Q9H0F5 AC108860.1-201ENST00000484521 383 ntBASIC4.28□□□□□ -1.72
RNF38Q9H0F5 RNU6-677P-201ENST00000516914 101 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms