Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AL159987.2-201ENST00000432754 307 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 HIGD1AP11-201ENST00000438361 280 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 RPL23AP93-201ENST00000440847 484 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 HMGB3P8-201ENST00000449709 577 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 HMGB3P22-202ENST00000451823 572 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 RNU7-187P-201ENST00000458985 68 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 SNRPGP3-201ENST00000469405 227 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 HIGD1AP1-201ENST00000550979 275 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AC093249.1-201ENST00000567049 203 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 MIR3609-201ENST00000582661 80 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AC124303.1-201ENST00000605703 360 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 MIR1302-2-201ENST00000607096 138 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 AL161423.1-201ENST00000613700 262 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 MIR6076-201ENST00000617521 113 ntBASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TRIM55Q9BYV6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 Z98749.2-208ENST00000381646 500 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 RNU6-306P-201ENST00000384617 107 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AP000567.1-201ENST00000406413 156 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 RNU6-293P-201ENST00000411259 106 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 HSPE1P12-201ENST00000412576 301 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 SNORD56-201ENST00000413522 71 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC099548.1-201ENST00000421443 426 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC093151.1-201ENST00000427711 313 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AL590664.1-201ENST00000448065 339 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AL162151.2-201ENST00000448875 158 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 RPL37P4-201ENST00000448908 268 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 MRPS31P2-201ENST00000451581 518 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 RNU7-152P-201ENST00000458982 64 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC005741.1-201ENST00000511094 432 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 ANP32BP3-201ENST00000559213 706 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC008121.1-201ENST00000603244 268 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 AC008962.1-201ENST00000605729 304 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 uc_338.32-201ENST00000615087 172 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 MIR7702-201ENST00000621931 59 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM55Q9BYV6 KPNA2P1-201ENST00000458289 1591 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 SRP72P2-201ENST00000344851 1979 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.138-201ENST00000363462 102 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 RPS29P17-201ENST00000430795 166 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 NUTF2P3-201ENST00000448540 384 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 RN7SL303P-201ENST00000469773 251 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 RPL23AP45-201ENST00000476406 468 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AC026782.1-201ENST00000512952 449 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 Y_RNA.687-201ENST00000516558 91 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 CYCSP29-201ENST00000533731 318 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 MIR5690-201ENST00000583739 73 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AP000787.2-201ENST00000604432 568 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AC012468.1-201ENST00000604888 430 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AL160281.1-201ENST00000605307 311 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AL121917.1-203ENST00000605534 577 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AL133215.3-201ENST00000609801 448 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AC073308.1-201ENST00000623696 305 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 AL669831.3-213ENST00000636676 183 ntBASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM55Q9BYV6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 RNU6-1227P-201ENST00000383981 107 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 SNORA37-201ENST00000384504 129 ntBASIC4.26□□□□□ -1.73
TRIM55Q9BYV6 RPL5P18-201ENST00000406671 891 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms