Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 snoU109.4-201ENST00000458953 143 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU5E-3P-201ENST00000515913 68 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNA5SP76-201ENST00000516277 87 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 RNU6-567P-201ENST00000516746 107 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 MIR4431-201ENST00000579990 94 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AC022726.1-201ENST00000587475 207 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AC011603.4-201ENST00000611325 277 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 U1.25-201ENST00000614085 162 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 SAGE4P-201ENST00000442271 3381 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 AL360270.2-201ENST00000562952 5985 ntBASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL25A1Q9BXS0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RNA5SP197-201ENST00000363357 119 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 Y_RNA.172-201ENST00000363765 102 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RNU6-512P-201ENST00000364438 103 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RNU4-9P-201ENST00000364951 139 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RNU6-17P-201ENST00000384245 107 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RNU6-843P-201ENST00000384454 104 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RNU6-18P-201ENST00000384527 107 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 Y_RNA.525-201ENST00000384570 113 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 HMGB1P27-201ENST00000431429 603 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RNU7-107P-201ENST00000459121 61 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RPL23AP45-201ENST00000476406 468 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 RN7SKP272-201ENST00000516988 232 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AC022616.8-201ENST00000533569 253 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 OR4H12P-201ENST00000556269 907 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 TRAV28-201ENST00000557548 323 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AC010928.2-201ENST00000588017 287 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AL133481.2-203ENST00000607558 139 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 AL365440.1-201ENST00000436135 2167 ntBASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.94□□□□□ -1.62
COL25A1Q9BXS0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AC011504.1-201ENST00000623331 4103 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 RNU6-384P-201ENST00000364900 104 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 RNU1-74P-201ENST00000384108 171 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 RNU1-136P-201ENST00000384181 164 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 MIR92A2-201ENST00000385299 75 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 RPL31P2-201ENST00000413849 377 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AP000907.1-201ENST00000428428 510 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AL162151.2-201ENST00000448875 158 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 MTATP6P7-201ENST00000453315 681 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 RNU7-197P-201ENST00000458836 62 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AL049873.1-201ENST00000480540 376 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 RPS15AP34-201ENST00000487776 387 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AL645944.1-201ENST00000603857 493 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AC005046.1-201ENST00000608515 625 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 AC093671.1-201ENST00000624981 2929 ntBASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.93□□□□□ -1.62
COL25A1Q9BXS0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms