Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RNU1-94P-201ENST00000362627 173 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RNU1-83P-201ENST00000363426 164 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 Y_RNA.199-201ENST00000364014 102 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RNU6-146P-201ENST00000384602 108 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 MIR659-201ENST00000384963 97 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RPS29P13-201ENST00000402041 169 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 EI24P1-201ENST00000416584 867 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 AC091286.1-201ENST00000431233 461 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 AC092573.2-201ENST00000434546 243 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RPL12P46-201ENST00000436610 195 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 PIGFP3-201ENST00000441918 722 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RPL23AP24-201ENST00000458203 385 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RPL7P49-201ENST00000471402 708 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RN7SL860P-201ENST00000473738 223 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 AC012158.1-204ENST00000483430 465 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RPL30P10-201ENST00000488148 337 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 GMPSP1-201ENST00000514075 579 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 SERF1AP1-201ENST00000514575 187 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RNU6-143P-201ENST00000516942 93 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 AC015912.2-201ENST00000571053 181 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 AC091178.1-203ENST00000584586 279 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 BDH2P1-201ENST00000602288 736 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 AC004852.3-201ENST00000614131 326 ntBASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SSBP3Q9BWW4 CPHL1P-201ENST00000461341 3407 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 SNORD113-1-201ENST00000365321 69 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 Y_RNA.534-201ENST00000384599 112 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 U3.22-201ENST00000391120 215 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 LAP3P1-201ENST00000403648 294 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 MTCYBP2-201ENST00000407745 171 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RNA5SP494-201ENST00000410653 129 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RNU4-78P-201ENST00000410940 126 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RPL7AP73-201ENST00000413490 353 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC098831.1-201ENST00000440661 216 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RANP8-201ENST00000444720 713 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 TDGF1P1-201ENST00000445734 527 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC012671.1-201ENST00000451912 203 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RN7SL810P-201ENST00000493031 276 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AL359273.1-201ENST00000510918 627 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RNA5SP497-201ENST00000516081 97 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 MIR892C-201ENST00000516410 77 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC022790.1-201ENST00000522872 204 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AL442163.3-201ENST00000554110 156 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RN7SL176P-201ENST00000580352 264 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 MIR4300-201ENST00000581016 96 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 BPIFA4P-203ENST00000603168 689 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AP000787.2-201ENST00000604432 568 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 AC005086.4-201ENST00000623065 213 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RLIMP1-201ENST00000339626 1680 ntBASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.73□□□□□ -1.81
SSBP3Q9BWW4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 Y_RNA.122-201ENST00000363331 96 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 RNU6-263P-201ENST00000363811 107 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 RNA5SP509-201ENST00000364577 119 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 MIR195-201ENST00000385194 87 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 AL096701.2-201ENST00000416920 238 ntBASIC3.72□□□□□ -1.81
SSBP3Q9BWW4 SSXP9-201ENST00000417503 292 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms