Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 CYCSP39-201ENST00000565821 309 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 MIR3167-201ENST00000579623 85 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC138761.3-201ENST00000579993 334 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 NRBF2P1-201ENST00000587407 859 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AL355877.2-201ENST00000603670 358 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC005046.1-201ENST00000608515 625 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AL133173.2-201ENST00000614270 90 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC022079.1-201ENST00000621546 602 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC090617.7-201ENST00000623952 126 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 MIR6733-201ENST00000635723 61 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.2□□□□□ -1.9
SDF4Q9BRK5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SDF4Q9BRK5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 RNY4P34-201ENST00000364779 95 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 RNU6-190P-201ENST00000384154 102 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 Y_RNA.510-201ENST00000384511 114 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AL512633.1-201ENST00000399931 655 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 MIR887-201ENST00000401258 79 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 RNU6-248P-201ENST00000410720 107 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AL353729.1-201ENST00000425044 720 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 BRK1P2-201ENST00000442875 223 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 GSTA11P-201ENST00000452866 669 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 SNORA59A-201ENST00000459326 152 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AC128713.1-201ENST00000471495 306 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AC004924.1-201ENST00000480160 781 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AC139453.3-201ENST00000493276 369 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 Y_RNA.688-201ENST00000516565 95 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 RNU6-914P-201ENST00000516749 109 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 OR5B19P-201ENST00000531766 928 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 MIR3605-201ENST00000583214 100 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AC073114.1-201ENST00000612027 490 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 AC130324.3-201ENST00000614165 542 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 Z99571.1-201ENST00000636677 394 ntBASIC3.19□□□□□ -1.9
SDF4Q9BRK5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SDF4Q9BRK5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 RPL23AP30-201ENST00000432419 501 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC073614.1-201ENST00000438690 650 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 MTND2P4-201ENST00000445034 1004 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC003982.1-202ENST00000469928 248 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 RPL9P33-201ENST00000484311 566 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC109927.2-201ENST00000506416 303 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC117522.3-201ENST00000507974 584 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 RNA5SP356-201ENST00000515972 94 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 GLYCAM1-201ENST00000546596 285 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 ZNF861P-201ENST00000588126 639 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC090578.1-201ENST00000604955 591 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC019159.1-201ENST00000605094 187 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 ATP1B3P1-201ENST00000605365 821 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AC011939.3-201ENST00000613686 466 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 AL158063.1-201ENST00000615349 536 ntBASIC3.18□□□□□ -1.9
SDF4Q9BRK5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SDF4Q9BRK5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 MTND4P35-201ENST00000604257 1375 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 RNU6-169P-201ENST00000365336 107 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 RNU2-39P-201ENST00000410604 198 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 RNU2-49P-201ENST00000410666 184 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC080125.1-201ENST00000414888 684 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AL139281.1-201ENST00000422120 335 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 SAR1AP4-201ENST00000429225 591 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 HMGN2P10-201ENST00000448085 265 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 AC009961.3-201ENST00000449832 765 ntBASIC3.17□□□□□ -1.9
SDF4Q9BRK5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
SDF4Q9BRK5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms