Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 MTND2P9-201ENST00000422293 931 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC236972.1-201ENST00000433225 199 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 MTCYBP39-201ENST00000437562 491 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 AL591719.1-201ENST00000444669 744 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC104389.3-201ENST00000445629 235 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AL513328.1-201ENST00000446460 224 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 MTATP6P7-201ENST00000453315 681 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 SNORD97-201ENST00000459187 142 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 TRBV1-201ENST00000476502 284 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 RPS27P27-201ENST00000498779 255 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 RNU6-703P-201ENST00000516946 107 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 SNORA31.18-201ENST00000517043 134 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 RPL7P20-201ENST00000520308 745 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC107934.1-201ENST00000522215 217 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC091489.2-201ENST00000566263 604 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC007151.1-201ENST00000572774 483 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC073544.2-201ENST00000601155 540 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AL391813.1-201ENST00000603098 260 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AL356280.1-201ENST00000603614 379 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC121334.2-201ENST00000605387 271 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC011939.3-201ENST00000613686 466 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC006338.1-201ENST00000618453 749 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC093591.3-201ENST00000634516 308 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 AC010149.2-201ENST00000637608 315 ntBASIC2.44□□□□□ -2.02
VPS35Q96QK1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS35Q96QK1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VPS35Q96QK1 AL137003.2-201ENST00000606924 2538 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC007336.1-201ENST00000576365 3828 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS35Q96QK1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 RNU6-500P-201ENST00000362349 107 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 RNU5F-6P-201ENST00000362979 116 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 RNU6-511P-201ENST00000363496 107 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 RNU6-501P-201ENST00000364072 100 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AL162578.1-201ENST00000406202 378 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 MTCO2P17-201ENST00000424336 677 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AL592045.1-201ENST00000429867 352 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 MTND4P25-201ENST00000441039 533 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 HMGN2P10-201ENST00000448085 265 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 UBE2DNL-203ENST00000474922 222 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC068587.2-201ENST00000478386 781 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC026801.1-201ENST00000497178 464 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 SNORA31.6-201ENST00000516241 130 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC109329.2-201ENST00000519658 482 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC006199.1-201ENST00000548728 219 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC021739.1-201ENST00000559631 174 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 PCMTD1P2-201ENST00000565017 355 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 MIR3616-201ENST00000584070 92 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 AL445523.1-201ENST00000451184 1362 ntBASIC2.43□□□□□ -2.02
VPS35Q96QK1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS35Q96QK1 AC080128.1-201ENST00000474389 1917 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS35Q96QK1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AL139276.1-201ENST00000311910 1001 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 NACAP2-201ENST00000318548 624 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 RNU6-288P-201ENST00000363690 104 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 RNU6-533P-201ENST00000384144 107 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 SNORA41-201ENST00000384675 132 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 SNORA67.4-201ENST00000384688 142 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AL593851.1-201ENST00000426171 157 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AL365184.2-201ENST00000431139 435 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 AC011753.1-201ENST00000451001 220 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 SSXP1-201ENST00000453640 473 ntBASIC2.42□□□□□ -2.02
VPS35Q96QK1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS35Q96QK1 SNORA59A-201ENST00000459326 152 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms