Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC009220.3-201ENST00000604318 586 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 AL592148.2-201ENST00000612210 372 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 AL136313.1-201ENST00000624804 202 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 RPL30P14-201ENST00000482744 348 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 AL160236.1-201ENST00000556317 195 ntBASIC0.39□□□□□ -2.35
CSMD1Q96PZ7 MTND5P14-201ENST00000441481 1267 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 CBX3P3-201ENST00000508108 532 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 Y_RNA.659-201ENST00000515994 113 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AC008945.2-201ENST00000606056 604 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AL121890.5-201ENST00000620848 304 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 ZNF29P-201ENST00000225587 168 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 RNA5SP450-201ENST00000411206 102 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 RNY1P9-201ENST00000532431 109 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 MIR3690-201ENST00000580266 75 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 MIR5190-201ENST00000581537 80 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AL109918.3-201ENST00000603072 338 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AC097372.5-201ENST00000623665 376 ntBASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.38□□□□□ -2.35
CSMD1Q96PZ7 SNORA22-201ENST00000383907 134 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 SNORA22C-201ENST00000384614 134 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 HMGB3P10-201ENST00000434734 572 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 HMGN2P16-201ENST00000456802 261 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 HSPE1P22-201ENST00000456856 327 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AC087884.1-201ENST00000469738 328 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 LLPHP1-201ENST00000603571 367 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AL391516.1-201ENST00000554380 2449 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 MIR515-2-201ENST00000384883 83 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 MIR515-1-201ENST00000384884 83 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 MIR3117-201ENST00000584034 78 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AL136363.1-201ENST00000605349 337 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AC109454.4-201ENST00000623411 649 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AC067940.1-201ENST00000458411 300 ntBASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CSMD1Q96PZ7 RNU1-96P-201ENST00000364163 162 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 SNORA16B-201ENST00000364674 135 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 RNU2-71P-201ENST00000411395 189 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 UBE2FP1-201ENST00000416536 447 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 OR6C72P-201ENST00000451403 892 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 OR5AL2P-201ENST00000532185 920 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 MIR934-201ENST00000401241 83 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 OSTCP8-201ENST00000445117 448 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 CASP3P1-201ENST00000446037 609 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 SNORD124-201ENST00000459577 104 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 RNU1-61P-201ENST00000516107 151 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 AC245128.3-201ENST00000594721 748 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 MIR676-201ENST00000390702 67 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 AP002784.2-201ENST00000397300 549 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 AL356131.1-201ENST00000405826 414 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 AL133384.1-201ENST00000412744 351 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 CLIC4P2-201ENST00000601934 717 ntBASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CSMD1Q96PZ7 SNORA14A-201ENST00000364773 135 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 OFD1P18Y-201ENST00000420889 959 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 PRELID3BP1-201ENST00000457142 540 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AC078857.1-201ENST00000469870 667 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 RNA5SP468-201ENST00000516782 93 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 VN1R84P-201ENST00000593697 235 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AC004987.4-201ENST00000603383 338 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AC003001.2-201ENST00000616294 831 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 HMGB1P17-201ENST00000403495 628 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AL512604.1-201ENST00000404812 257 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 RPL22P13-201ENST00000493291 347 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AL627230.6-201ENST00000611129 280 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 RNU6-50P-201ENST00000362356 103 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 SNORA7.2-201ENST00000364446 145 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 MIR32-201ENST00000384965 70 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 MIR92A1-201ENST00000385233 78 ntBASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD1Q96PZ7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.34□□□□□ -2.35
CSMD1Q96PZ7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.34□□□□□ -2.35
CSMD1Q96PZ7 ELOCP10-201ENST00000440624 327 ntBASIC0.34□□□□□ -2.35
CSMD1Q96PZ7 MTND5P8-201ENST00000449817 1083 ntBASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms