Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-37P-201ENST00000362692 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-626P-201ENST00000363354 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-11P-201ENST00000364234 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-7-201ENST00000364784 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-8-201ENST00000365467 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU4-17P-201ENST00000365598 141 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-25P-201ENST00000383873 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-1-201ENST00000383898 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-36P-201ENST00000384172 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-4P-201ENST00000384205 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-5P-201ENST00000384238 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-3P-201ENST00000384314 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-16P-201ENST00000384385 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-15P-201ENST00000384534 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-2-201ENST00000384627 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-29P-201ENST00000384637 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-1179P-201ENST00000384667 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-9-201ENST00000384776 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 SNORD12B-201ENST00000410433 91 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RN7SKP177-201ENST00000410567 355 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AL117339.3-201ENST00000418733 162 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 CKS1BP5-201ENST00000434172 273 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 MTCO1P44-201ENST00000441935 243 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC022493.1-201ENST00000492984 337 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC026726.1-201ENST00000512859 601 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC022616.8-201ENST00000533569 253 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RNU6-6P-201ENST00000606623 107 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC011603.4-201ENST00000611325 277 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AC090971.4-201ENST00000560291 1800 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 AL365440.1-201ENST00000436135 2167 ntBASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CNTNAP3BQ96NU0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CNTNAP3BQ96NU0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.96□□□□□ -1.61
CNTNAP3BQ96NU0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RN7SKP280-201ENST00000364196 304 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-1175P-201ENST00000365200 107 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-356P-201ENST00000384140 107 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AL009179.1-201ENST00000406085 265 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 CRYBB2P1-203ENST00000415709 538 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RPL23AP3-201ENST00000453844 468 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 snoU13.30-201ENST00000458951 104 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RN7SL542P-201ENST00000467147 294 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RPL21P126-201ENST00000470049 478 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-927P-201ENST00000516199 100 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-567P-201ENST00000516746 107 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 RNU6-143P-201ENST00000516942 93 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 SNORA31.22-201ENST00000517204 135 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AC103996.1-201ENST00000555468 102 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AL161713.1-201ENST00000555538 145 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AP005403.1-201ENST00000579720 229 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AC060766.3-201ENST00000591442 263 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AL133481.2-203ENST00000607558 139 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AC005046.1-201ENST00000608515 625 ntBASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CNTNAP3BQ96NU0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNTNAP3BQ96NU0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms