Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC008521.1-201ENST00000587471 187 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC107304.1-201ENST00000604229 296 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 MIR15A-201ENST00000607334 83 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AC107294.1-201ENST00000609524 467 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 AL512643.1-201ENST00000635735 524 ntBASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SH3KBP1Q96B97 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 ELF2P3-201ENST00000445099 1506 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 RNU6-140P-201ENST00000384566 108 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 MIR181A1-201ENST00000385026 110 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AL645937.1-202ENST00000421799 937 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AL121769.1-201ENST00000469473 401 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 RPS26P21-201ENST00000475397 348 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC009901.1-201ENST00000506703 541 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 RNU6-914P-201ENST00000516749 109 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 RNU6-143P-201ENST00000516942 93 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 MTND4LP26-201ENST00000518144 282 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 HMGB1P33-201ENST00000563485 527 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 MIR5195-201ENST00000583555 115 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC025165.5-201ENST00000602802 578 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC004805.2-201ENST00000605382 482 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC093788.1-201ENST00000609356 927 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 MTND5P17-201ENST00000418405 1603 ntBASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3KBP1Q96B97 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 RNU1-105P-201ENST00000363470 161 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 SNORA4.3-201ENST00000365564 137 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 RPL5P18-201ENST00000406671 891 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AL109913.1-201ENST00000421173 514 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 ZNF863P-201ENST00000426746 417 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 RPL36AP53-201ENST00000432891 316 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 HMGB3P11-201ENST00000440127 604 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 CACYBPP2-201ENST00000453625 678 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 Y_RNA.693-201ENST00000516641 110 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 RNA5SP165-201ENST00000517142 115 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC104383.1-201ENST00000530297 370 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 RANP3-201ENST00000530970 276 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AP003034.1-201ENST00000534621 422 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC025678.1-201ENST00000567861 338 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC020895.1-201ENST00000595362 272 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC136601.2-201ENST00000604356 474 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC007621.1-201ENST00000604544 437 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AP001330.5-201ENST00000607176 411 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AL359547.2-201ENST00000615810 418 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 AC002064.3-201ENST00000623448 346 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.35□□□□□ -1.87
SH3KBP1Q96B97 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 FTLP6-201ENST00000355274 422 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 RNU6-996P-201ENST00000365438 107 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 RNU6-198P-201ENST00000384258 104 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 RNU6-1035P-201ENST00000384477 107 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 RNU6-606P-201ENST00000384721 111 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 BTF3P7-201ENST00000407097 488 ntBASIC3.34□□□□□ -1.87
SH3KBP1Q96B97 RPL7P10-201ENST00000417407 739 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms