Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC245014.2-201ENST00000603689 287 ntBASIC2.83□□□□□ -1.96
VPS33AQ96AX1 AC246785.4-201ENST00000605374 287 ntBASIC2.83□□□□□ -1.96
VPS33AQ96AX1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS33AQ96AX1 AL161734.1-201ENST00000609720 557 ntBASIC2.83□□□□□ -1.96
VPS33AQ96AX1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
VPS33AQ96AX1 uc_338.14-201ENST00000613162 166 ntBASIC2.83□□□□□ -1.96
VPS33AQ96AX1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.83□□□□□ -1.96
VPS33AQ96AX1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 RPL9P7-201ENST00000330965 580 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 RNU6-19P-201ENST00000384718 107 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AL356057.2-201ENST00000403318 432 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 RPL19P1-201ENST00000411635 428 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC007560.1-201ENST00000426912 237 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC005326.1-201ENST00000429197 123 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 MICF-203ENST00000432679 129 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC126389.1-201ENST00000477436 290 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 SNORA18.6-201ENST00000516792 115 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 RNU6-410P-201ENST00000517006 107 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC064872.1-201ENST00000604823 1072 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 RPL23AP88-201ENST00000605759 454 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC109347.2-201ENST00000610220 349 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AL158063.1-201ENST00000615349 536 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 MIR7112-201ENST00000616126 65 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 AC024940.5-201ENST00000622889 474 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 MTND5P30-201ENST00000452896 1731 ntBASIC2.82□□□□□ -1.96
VPS33AQ96AX1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
VPS33AQ96AX1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 RNU6-179P-201ENST00000363350 107 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 SNORA62.3-201ENST00000365110 153 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 RNU6-61P-201ENST00000365528 109 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 RNU6-166P-201ENST00000384371 107 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 MIR200C-201ENST00000384980 68 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 RN7SKP142-201ENST00000411236 328 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 BX682237.1-201ENST00000415016 335 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC009518.2-201ENST00000418056 731 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AL160275.3-201ENST00000423876 471 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 GPR143P-201ENST00000434155 205 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 RPS20P5-201ENST00000434808 360 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AL445687.1-201ENST00000439946 251 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC009961.3-201ENST00000449832 765 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC233279.1-201ENST00000455300 423 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC117440.1-201ENST00000474107 571 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC004924.1-201ENST00000480160 781 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC006445.1-201ENST00000491925 405 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC023194.1-201ENST00000493084 308 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC116562.3-201ENST00000506136 177 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 RNU6-123P-201ENST00000516163 102 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 SNORA31.6-201ENST00000516241 130 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 SNORA67.7-201ENST00000516664 135 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 PSMA2P1-201ENST00000526365 646 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC068587.5-201ENST00000528506 175 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC234778.2-201ENST00000566241 354 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 MIR3117-201ENST00000584034 78 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AL158032.1-201ENST00000605401 106 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AC010338.1-201ENST00000621823 717 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 ASNSP3-201ENST00000451989 1306 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS33AQ96AX1 AL035425.3-201ENST00000564206 4996 ntBASIC2.81□□□□□ -1.96
VPS33AQ96AX1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 MTND5P17-201ENST00000418405 1603 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 RNU1-35P-201ENST00000362782 153 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 RNU6-108P-201ENST00000365558 107 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 RNU6-748P-201ENST00000384648 107 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.8□□□□□ -1.96
VPS33AQ96AX1 RNU4-47P-201ENST00000410876 114 ntBASIC2.8□□□□□ -1.96
VPS33AQ96AX1 RNU6-195P-201ENST00000411352 109 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms