Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 SNORD56-201ENST00000413522 71 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC092423.1-201ENST00000430165 186 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC133134.1-201ENST00000466800 359 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC108751.2-201ENST00000469993 231 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC105137.1-201ENST00000484355 562 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 RPL36AP41-201ENST00000493820 306 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 RNU6-897P-201ENST00000517135 105 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC109329.1-201ENST00000518744 317 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC144568.1-201ENST00000520139 137 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC096772.1-201ENST00000609146 564 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 AC141273.2-201ENST00000618989 130 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 NCAPGP1-201ENST00000505112 1814 ntBASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.17□□□□□ -1.58
VTI1AQ96AJ9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 MFSD8-242ENST00000641690 4199 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AC021146.4-201ENST00000309229 279 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AC007685.1-201ENST00000329806 452 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RNA5SP28-201ENST00000363841 119 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RNU4-50P-201ENST00000364361 141 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RNA5SP235-201ENST00000365411 114 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RNU6-209P-201ENST00000384118 107 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RNU6-1181P-201ENST00000384191 106 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RN7SKP177-201ENST00000410567 355 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RN7SL810P-201ENST00000493031 276 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 PARP4P3-201ENST00000510265 317 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 RNU6-1023P-201ENST00000516137 106 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 SNORA40.15-201ENST00000516884 107 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AP004371.1-201ENST00000525240 214 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AP004242.1-201ENST00000533701 349 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 CYCSP29-201ENST00000533731 318 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 MIR5696-201ENST00000578474 85 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 ZNF299P-201ENST00000406845 1804 ntBASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VTI1AQ96AJ9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
VTI1AQ96AJ9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
VTI1AQ96AJ9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.15□□□□□ -1.58
VTI1AQ96AJ9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.15□□□□□ -1.58
VTI1AQ96AJ9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VTI1AQ96AJ9 RNU1-94P-201ENST00000362627 173 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 Y_RNA.105-201ENST00000363182 111 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 RNU6-827P-201ENST00000365553 106 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 Y_RNA.526-201ENST00000384572 110 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 MIR521-1-201ENST00000384902 87 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 SAR1AP2-201ENST00000392696 594 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 RPS6P12-201ENST00000432491 726 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 RPL23AP93-201ENST00000440847 484 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 RPL23AP65-201ENST00000475608 468 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 RN7SL817P-201ENST00000480777 288 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 RNU6-570P-201ENST00000517051 105 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 SNORA31.20-201ENST00000517111 133 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 MRPL49P2-201ENST00000521066 465 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 AC106785.1-201ENST00000565935 262 ntBASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VTI1AQ96AJ9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VTI1AQ96AJ9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms